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S28_scaffold_213_curated

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_213_curated_trna_1
unknown

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comp(150..223)
DNA (74bp)
transferRNA Arg
S28_scaffold_213_curated_1
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(314..1003)
DNA (690bp) protein (230aa)
Uncharacterized protein n=2 Tax=Geobacter metallireducens RepID=Q39WV3_GEOMG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB31271.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
S28_scaffold_213_curated_2
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1330..1863
DNA (534bp) protein (178aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6Y6_GEOUR
Tax=GWC2_Geobacteraceae_58_44_curated
S28_scaffold_213_curated_3
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1927..3255
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q749N2_GEOSL
Uncharacterized protein {ECO:0000313|EMBL:AJY68998.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
hypothetical protein
S28_scaffold_213_curated_4
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3660..4787
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M146_GEODF rbh
hypothetical protein rbh
DUF362 iron-sulfur cluster-binding domain protein {ECO:0000313|EMBL:ACM19116.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
S28_scaffold_213_curated_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5106..6188)
DNA (1083bp) protein (361aa)
Phospholipase D/Transphosphatidylase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBA7_GEOUR rbh
phospholipase D/transphosphatidylase rbh
Phospholipase D/Transphosphatidylase {ECO:0000313|EMBL:ABQ25143.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
S28_scaffold_213_curated_6
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6360..6581)
DNA (222bp) protein (74aa)
Thioredoxin/NifU-like domain protein n=2 Tax=Geobacter metallireducens RepID=Q39R30_GEOMG
thioredoxin/NifU-like domain-containing protein
Thioredoxin/NifU-like domain protein {ECO:0000313|EMBL:ABB33294.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
S28_scaffold_213_curated_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6581..8683)
DNA (2103bp) protein (701aa)
aspA; aspartate ammonia-lyase (EC:4.3.1.1) rbh
Fumarase {ECO:0000313|EMBL:ABQ25146.1}; EC=4.2.1.2 {ECO:0000313|EMBL:ABQ25146.1};; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Fumarase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GB90_GEOUR rbh
S28_scaffold_213_curated_8
unknown

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comp(9311..9445)
DNA (135bp) protein (45aa)

This feature has no annotations

S28_scaffold_213_curated_9
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9474..10235
DNA (762bp) protein (254aa)
Magnesium-dependent deoxyribonuclease, TatD family n=1 Tax=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) RepID=Q39QM5_GEOMG
magnesium-dependent deoxyribonuclease, TatD family
Magnesium-dependent deoxyribonuclease, TatD family {ECO:0000313|EMBL:ABB33449.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
S28_scaffold_213_curated_10
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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10403..11173
DNA (771bp) protein (257aa)
YgdL family protein n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EDL4_GEOBB rbh
YgdL family protein rbh
YgdL family protein {ECO:0000313|EMBL:ACH39210.1}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622).;"
S28_scaffold_213_curated_11
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11430..11927
DNA (498bp) protein (166aa)
Rubrerythrin n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G9U0_GEOUR
rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:ABQ28558.1}; Flags: Precursor;; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
S28_scaffold_213_curated_12
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12315..13520
DNA (1206bp) protein (402aa)
Phosphate-selective outer membrane channel n=2 Tax=Geobacter metallireducens RepID=Q39WU2_GEOMG
phosphate-selective outer membrane channel
Phosphate-selective outer membrane channel {ECO:0000313|EMBL:ABB31282.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
S28_scaffold_213_curated_13
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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13673..14527
DNA (855bp) protein (285aa)
ABC-type tungstate transport system, solute-binding protein id=3180914 bin=GWF2_Geobacter_54_21 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good rbh
tungstate ABC transporter substrate-binding protein rbh
Tax=GWC2_Geobacteraceae_55_20_curated
S28_scaffold_213_curated_14
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14563..15429
DNA (867bp) protein (289aa)
ABC-type tungstate transport system, solute-binding protein id=4033210 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good + rbh
tungstate ABC transporter permease component-like protein rbh
Tax=BJP_IG2069_Syntrophobacterales_46_30
S28_scaffold_213_curated_15
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15433..16131
DNA (699bp) protein (233aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Geobacter sp. (strain M21) RepID=C6E024_GEOSM rbh
binding-protein-dependent transporters inner membrane component rbh
Tax=GWC2_Geobacteraceae_58_44_curated
S28_scaffold_213_curated_16
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16128..17222
DNA (1095bp) protein (365aa)
Tungstate ABC transporter, ATP-binding protein n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5E9H0_GEOBB rbh
tupC; tungstate ABC transporter ATP-binding protein rbh
Tungstate ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ACH38712.1}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622).;"
S28_scaffold_213_curated_17
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17402..18592
DNA (1191bp) protein (397aa)
Molybdopterin--molybdenum ligase n=2 Tax=Geobacter metallireducens RepID=Q39WU6_GEOMG rbh
molybdenum cofactor biosynthesis protein MoeA
Molybdenum cofactor biosynthesis protein MoeA {ECO:0000313|EMBL:AJE02729.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
S28_scaffold_213_curated_18
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18646..19128
DNA (483bp) protein (161aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=MOAC_GEOUR
molybdenum cofactor biosynthesis protein C
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000255|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000255|HAMAP-Rule:MF_01224}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
S28_scaffold_213_curated_19
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19125..19610
DNA (486bp) protein (162aa)
Molybdopterin adenylyltransferase MoaB, putative n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q749N7_GEOSL
moaB; molybdopterin adenylyltransferase MoaB
Molybdopterin adenylyltransferase MoaB, putative {ECO:0000313|EMBL:AAR36077.1}; TaxID=243231 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
S28_scaffold_213_curated_20
unknown

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19813..19992
DNA (180bp) protein (60aa)

This feature has no annotations

S28_scaffold_213_curated_21
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20399..22579)
DNA (2181bp) protein (727aa)
Aldehyde ferredoxin oxidoreductase (EC:1.2.7.5) rbh
Aldehyde ferredoxin oxidoreductase n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M973_GEODF rbh
Tungsten-containing formaldehyde ferredoxin oxidoreductase {ECO:0000313|EMBL:GAM09735.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
S28_scaffold_213_curated_22
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22940..23680
DNA (741bp) protein (247aa)
4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GD37_GEOUR
4Fe-4S ferredoxin
4Fe-4S ferredoxin, iron-sulfur binding domain protein {ECO:0000313|EMBL:ABQ24510.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
S28_scaffold_213_curated_23
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

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23894..24382
DNA (489bp) protein (163aa)
Metal dependent phosphohydrolase id=3982221 bin=GWF2_Lentisphaerae_49_21 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
metal dependent phosphohydrolase
Tax=RBG_16_Chloroflexi_60_22_curated
S28_scaffold_213_curated_24
GWC2_Geobacteraceae_48_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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24484..25077
DNA (594bp) protein (198aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen id=2135118 bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria rbh
alkyl hydroperoxide reductase rbh
Tax=GWC2_Geobacteraceae_48_7_curated
S28_scaffold_213_curated_25
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25650..26660
DNA (1011bp) protein (337aa)
Radical SAM domain protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GD23_GEOUR
radical SAM protein
Radical SAM protein {ECO:0000313|EMBL:AJE04423.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
Displaying 26 items

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