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S28_scaffold_731_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_731_curated_1
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(3..311)
DNA (309bp) protein (103aa)
integral membrane protein CcmA id=721265 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
integral membrane protein CcmA
Integral membrane protein CcmA {ECO:0000313|EMBL:AFH48477.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_731_curated_2
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

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comp(611..1165)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Melioribacter roseus P3M RepID=I6Z6Y9_MELRP id=721152 bin=RAAC39 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
hypothetical protein
Tax=RIFOXYB2_FULL_RIF07_49_35_curated
S28_scaffold_731_curated_3
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(1395..1715)
DNA (321bp) protein (107aa)
Tax=RBG_13_Ignavibacteria_36_8_curated
S28_scaffold_731_curated_4
unknown

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comp(1782..1907)
DNA (126bp) protein (42aa)

This feature has no annotations

S28_scaffold_731_curated_5
unknown

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comp(1904..2065)
DNA (162bp) protein (54aa)
hypothetical protein id=721147 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
S28_scaffold_731_curated_6
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(2210..2596)
DNA (387bp) protein (129aa)
LuxR family two component transcriptional regulator id=721145 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
chemotaxis protein CheY
Tax=CG_Ignavi_02
S28_scaffold_731_curated_7
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

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comp(2742..2894)
DNA (153bp) protein (51aa)
Putative uncharacterized protein id=5014548 bin=GWA2_Elusimicrobia_56_46 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
Tax=GWC2_Nitrospirae_57_9_curated
S28_scaffold_731_curated_8
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

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comp(3206..3412)
DNA (207bp) protein (69aa)
CsbD family protein id=7201212 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
Tax=RIFOXYC12_FULL_TA06_54_24_curated
S28_scaffold_731_curated_9
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3565..3777)
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Diplosphaera colitermitum TAV2 RepID=C0A3D4_9BACT id=721177 bin=RAAC39 species=Diplosphaera colitermitum genus=Diplosphaera taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=RAAC39 organism_group=Ignavibacteria
YjbJ protein {ECO:0000313|EMBL:GAO30805.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
CsbD family protein
S28_scaffold_731_curated_10
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(3905..4324)
DNA (420bp) protein (140aa)
coiled-coil id=721176 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Uncharacterized protein {ECO:0000313|EMBL:GAN31587.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
S28_scaffold_731_curated_11
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(4755..5384)
DNA (630bp) protein (210aa)
response regulator id=721175 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
response regulator
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
S28_scaffold_731_curated_12
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(5397..8231)
DNA (2835bp) protein (945aa)
putative histidine protein kinase n=1 Tax=Acidovorax radicis N35 RepID=UPI0002375EFF id=721172 bin=RAAC39 species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=RAAC39 organism_group=Ignavibacteria rbh
putative hybrid sensor histidine kinase rbh
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
S28_scaffold_731_curated_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8434..9270)
DNA (837bp) protein (279aa)
chu:CHU_2927 yhhT; permease id=721171 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99825.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 13 items

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