ggKbase home page

S28_scaffold_132_curated

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_132_curated_1
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

3..1115
DNA (1113bp) protein (371aa)
hypothetical protein id=719863 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
5'-nucleotidase domain-containing protein
Tax=CG_Bacteroid_01
S28_scaffold_132_curated_2
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(1422..2261)
DNA (840bp) protein (280aa)
hypothetical protein AtheD1_12427 n=1 Tax=Anaerophaga thermohalophila DSM 12881 RepID=UPI000237D011 id=719864 bin=RAAC39 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=RAAC39 organism_group=Ignavibacteria rbh
hypothetical protein
Tax=RBG_16_Ignavibacteria_36_9_curated
S28_scaffold_132_curated_3
unknown

Not on your lists

2591..2767
DNA (177bp) protein (59aa)

This feature has no annotations

S28_scaffold_132_curated_4
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

3356..3880
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Melioribacter roseus P3M RepID=I6Z9X4_MELRP id=718427 bin=RAAC39 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_36_9_curated
S28_scaffold_132_curated_5
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

3917..6151
DNA (2235bp) protein (745aa)
Capsular exopolysaccharide family n=1 Tax=Melioribacter roseus P3M RepID=I6ZVA1_MELRP id=718428 bin=RAAC39 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
capsular exopolysaccharide family
Tax=RBG_16_Ignavibacteria_36_9_curated
S28_scaffold_132_curated_6
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

6278..6982
DNA (705bp) protein (235aa)
UniRef90_B0VGT1 Putative Mannose-1-phosphate guanylyltransferase n=1 Tax=Candidatus Cloacamonas acidaminovorans str. Evry RepID=B0VGT1_CLOAI id=719915 bin=RAAC39 species=Candidatus Cloacimonas acidaminovorans genus=Candidatus Cloacimonas taxon_order=unknown taxon_class=unknown phylum=Cloacimonetes tax=RAAC39 organism_group=Ignavibacteria rbh
Nucleoside-diphosphate-sugar pyrophosphorylase family protein
Tax=RBG_16_Ignavibacteria_36_9_curated
S28_scaffold_132_curated_7
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

7422..8666
DNA (1245bp) protein (415aa)
UDP-Glycosyltransferase/glycogen phosphorylase id=719907 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_36_9_curated
S28_scaffold_132_curated_8
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

8707..9843
DNA (1137bp) protein (379aa)
N-acetyl sugar amidotransferase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U785_9CLOT id=719905 bin=RAAC39 species=Clostridium sp. Maddingley MBC34-26 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC39 organism_group=Ignavibacteria rbh
wbpG; LPS biosynthesis protein WbpG rbh
Tax=RBG_16_Ignavibacteria_36_9_curated
S28_scaffold_132_curated_9
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

10228..12063
DNA (1836bp) protein (612aa)
Asparagine synthase n=1 Tax=Marichromatium purpuratum 984 RepID=F9U3B6_MARPU id=719903 bin=RAAC39 species=Marichromatium purpuratum genus=Marichromatium taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RAAC39 organism_group=Ignavibacteria rbh
asnB; asparagine synthetase 1
Tax=RBG_16_Ignavibacteria_36_9_curated
S28_scaffold_132_curated_10
CG_CPR05_01, CG_CPR05, Bacteria

Not on your lists

12063..13538
DNA (1476bp) protein (492aa)
UniRef90_UPI00029A3154 polysaccharide biosynthesis protein n=1 Tax=Marinilabilia salmonicolor JCM 21150 RepID=UPI00029A3154 id=719902 bin=RAAC39 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=RAAC39 organism_group=Ignavibacteria rbh
polysaccharide biosynthesis protein
Tax=CG_CPR05_01
S28_scaffold_132_curated_11
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

13619..14818
DNA (1200bp) protein (400aa)
D-inositol-3-phosphate glycosyltransferase n=1 Tax=Segniliparus rugosus ATCC BAA-974 RepID=E5XS31_9ACTO id=719901 bin=RAAC39 species=Segniliparus rugosus genus=Segniliparus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RAAC39 organism_group=Ignavibacteria rbh
hypothetical protein
Tax=RBG_13_OP8X_37_8_curated
S28_scaffold_132_curated_12
unknown

Not on your lists

14855..14992
DNA (138bp) protein (46aa)

This feature has no annotations

S28_scaffold_132_curated_13
unknown

Not on your lists

14999..16426
DNA (1428bp) protein (476aa)
hypothetical protein AnHS1_03438 n=1 Tax=Anaerophaga sp. HS1 RepID=UPI000255D2F7 id=719898 bin=RAAC39 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=RAAC39 organism_group=Ignavibacteria rbh
S28_scaffold_132_curated_14
Bacillus infantis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16490..17710
DNA (1221bp) protein (407aa)
group 1 glycosyl transferase n=1 Tax=Marinilabilia salmonicolor JCM 21150 RepID=UPI00029A23E6 id=719896 bin=RAAC39 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=RAAC39 organism_group=Ignavibacteria rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX06498.1}; TaxID=1367477 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus infantis NRRL B-14911.;"
S28_scaffold_132_curated_15
Parachlamydia acanthamoebae, Parachlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

17864..18658
DNA (795bp) protein (265aa)
Glucose-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:CCB87583.1}; EC=2.7.7.33 {ECO:0000313|EMBL:CCB87583.1};; TaxID=765952 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Parachlamydia.;" source="Parachlamydia acanthamoebae (strain UV7).;"
Glucose-1-phosphate cytidylyltransferase n=2 Tax=Parachlamydia acanthamoebae RepID=F8KV61_PARAV rbh
rfbF; glucose-1-phosphate cytidylyltransferase rbh
S28_scaffold_132_curated_16
Campylobacter coli, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

18887..19969
DNA (1083bp) protein (361aa)
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EFM38060.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EFM38060.1};; TaxID=864566 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter coli JV20.;"
NAD dependent epimerase/dehydratase family protein n=3 Tax=Campylobacter coli RepID=E0QB79_CAMCO rbh
NAD-dependent epimerase/dehydratase family protein
S28_scaffold_132_curated_17
Bacillus sp. 1NLA3E, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19969..21234
DNA (1266bp) protein (422aa)
Putative UDP-glucose 6-dehydrogenase n=1 Tax=Bacillus sp. 1NLA3E RepID=N0AS97_9BACI rbh
putative UDP-glucose 6-dehydrogenase rbh
Putative UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:AGK53553.1}; TaxID=666686 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. 1NLA3E.;"
S28_scaffold_132_curated_18
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21247..21792
DNA (546bp) protein (182aa)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TQ41_TISMK
dTDP-4-dehydrorhamnose 3,5-epimerase RfbC
dTDP-4-dehydrorhamnose 3,5-epimerase RfbC {ECO:0000313|EMBL:BAP89389.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
S28_scaffold_132_curated_19
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21789..22733
DNA (945bp) protein (315aa)
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RAD6_9CHLA
Epimerase {ECO:0000313|EMBL:KHD05767.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
hypothetical protein
S28_scaffold_132_curated_20

Not on your lists

22726..23664
DNA (939bp) protein (313aa)
rhamnosyl transferase n=1 Tax=Thermophagus xiamenensis RepID=UPI000255D2F6
Uncharacterized protein {ECO:0000313|EMBL:KKN12095.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
glycosyltransferase
S28_scaffold_132_curated_21
Campylobacter sp. FOBRC14, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

23671..24684
DNA (1014bp) protein (338aa)
Polysaccharide deacetylase n=1 Tax=Campylobacter sp. FOBRC14 RepID=J4X7Z4_9PROT id=719893 bin=RAAC39 species=Campylobacter sp. FOBRC14 genus=Campylobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=RAAC39 organism_group=Ignavibacteria
Polysaccharide deacetylase {ECO:0000313|EMBL:EJP74585.1}; TaxID=936554 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter sp. FOBRC14.;"
hypothetical protein
S28_scaffold_132_curated_22
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24686..25732
DNA (1047bp) protein (349aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=K1H291_BACFG id=719892 bin=RAAC39 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=RAAC39 organism_group=Ignavibacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO29852.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
hypothetical protein
S28_scaffold_132_curated_23
RBG_16_Zixibacteria_40_9_curated, Zixibacteria, Bacteria

Not on your lists

25920..26927
DNA (1008bp) protein (336aa)
hypothetical protein; K07027 id=719891 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Zixibacteria_40_9_curated
S28_scaffold_132_curated_24
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

27095..28069
DNA (975bp) protein (325aa)
NAD dependent epimerase/dehydratase family protein id=4212173 bin=GWF2_Melioribacter_38_21 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria rbh
NAD-dependent epimerase/dehydratase rbh
Tax=RBG_16_Ignavibacteria_36_9_curated
S28_scaffold_132_curated_25
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28076..29215
DNA (1140bp) protein (380aa)
Putative DegT/DnrJ/EryC1/StrS aminotransferase family O-antigen related protein id=3330051 bin=GWF2_Bacteroidetes_35_48 species=Bacteroides fragilis genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81 rbh
putative DegT/DnrJ/EryC1/StrS aminotransferase family O-antigen related protein
Tax=GWA2_Bacteroidetes_30_7_curated
S28_scaffold_132_curated_26
Leptospira terpstrae, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

29223..30080
DNA (858bp) protein (286aa)
putative glycosyltransferase (EC:2.4.-.-) id=719889 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EMY61455.1}; EC=2.4.-.- {ECO:0000313|EMBL:EMY61455.1};; TaxID=1257025 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira terpstrae serovar Hualin str. LT 11-33 = ATCC 700639.;"
Glycosyl transferase, family 2 (EC:2.4.1.-)
S28_scaffold_132_curated_27
unknown

Not on your lists

30118..31542
DNA (1425bp) protein (475aa)
transmembrane_regions id=719885 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
S28_scaffold_132_curated_28
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31859..32992
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Bacteroides cellulosilyticus CL02T12C19 RepID=I8VEZ3_9BACE id=719884 bin=RAAC39 species=Bacteroides cellulosilyticus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=RAAC39 organism_group=Ignavibacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:EIY23902.1}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;"
hypothetical protein
S28_scaffold_132_curated_29
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

33165..34466
DNA (1302bp) protein (434aa)
GDP-mannose 6-dehydrogenase n=1 Tax=Algoriphagus machipongonensis RepID=A3HRR9_9BACT rbh
GDP-mannose 6-dehydrogenase {ECO:0000313|EMBL:EAZ82537.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensis.;"
GDP-mannose dehydrogenase
S28_scaffold_132_curated_30
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

34470..35603
DNA (1134bp) protein (378aa)
Glycosyl transferase, group 1 n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GU29_9SPHI
Glycosyl transferase, group 1 {ECO:0000313|EMBL:EOR95045.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
group 1 glycosyl transferase
Displaying items 1-30 of 55 in total

View Taxonomy