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S28_scaffold_588_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_588_curated_1
unknown

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3..101
DNA (99bp) protein (33aa)

This feature has no annotations

S28_scaffold_588_curated_2
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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79..924
DNA (846bp) protein (282aa)
Phytoene synthetase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AGK3_IGNAJ rbh
phytoene synthetase rbh
Phytoene synthetase {ECO:0000313|EMBL:AFH48110.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_588_curated_3
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1024..1605
DNA (582bp) protein (194aa)
lycopene cyclase n=1 Tax=Pedobacter agri RepID=UPI00029B29C6
Membrane protein {ECO:0000313|EMBL:KIA89172.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
membrane protein
S28_scaffold_588_curated_4
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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1778..2041
DNA (264bp) protein (88aa)
Excinuclease ABC subunit C n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6YZE1_MELRP
excinuclease ABC subunit C
Excinuclease ABC subunit C {ECO:0000313|EMBL:AFN75917.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus (strain JCM 17771 / P3M-2).;"
S28_scaffold_588_curated_5
Synechococcus elongatus, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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2224..3207
DNA (984bp) protein (328aa)
Uncharacterized protein n=2 Tax=Synechococcus elongatus RepID=Q5N0C2_SYNP6
ring-hydroxylating dioxygenase
Uncharacterized protein {ECO:0000313|EMBL:ABB58066.1}; TaxID=1140 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus elongatus (strain PCC 7942) (Anacystis nidulans R2).;"
S28_scaffold_588_curated_6
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3207..3941
DNA (735bp) protein (245aa)
Methyltransferase type 12 n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LGY4_HALO1
CrtT-methyltransferase-like protein {ECO:0000313|EMBL:AKF11430.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
type 12 methyltransferase
S28_scaffold_588_curated_7
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4037..5254
DNA (1218bp) protein (406aa)
Death-on-curing family protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RUU1_9BURK
Death-on-curing family protein {ECO:0000313|EMBL:EFV96074.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
hypothetical protein
S28_scaffold_588_curated_8
GWF2_OD1_40_10, Parcubacteria, Bacteria

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5256..6941
DNA (1686bp) protein (562aa)
Adenine specific DNA methylase Mod {ECO:0000313|EMBL:KKR38247.1}; TaxID=1618964 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_40_10.;"
Adenine specific DNA methylase Mod id=2446283 bin=GWF1_Spirochaetes_51_8 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade rbh
Adenine specific DNA methylase Mod rbh
S28_scaffold_588_curated_9
GWA1_OD1_36_12, Parcubacteria, Bacteria

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6941..9181
DNA (2241bp) protein (747aa)
Type III restriction enzyme, res subunit {ECO:0000313|EMBL:KKP93024.1}; TaxID=1618782 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_36_12.;"
hypothetical protein id=96044 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1 rbh
hypothetical protein rbh
S28_scaffold_588_curated_10
R_Nitrospinae_39_10, Nitrospinae, Bacteria

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9203..10327
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Leptospira meyeri serovar Semaranga str. Veldrot Semarang 173 RepID=M6CDT9_LEPME
Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
S28_scaffold_588_curated_11
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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10381..11163
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G200_9DELT
Phi-Carotenoid synthase {ECO:0000313|EMBL:EYF07787.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
phi-Carotenoid synthase
S28_scaffold_588_curated_12
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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11160..11894
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G200_9DELT
Phi-Carotenoid synthase {ECO:0000313|EMBL:EYF07787.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
Rieske (2Fe-2S) domain-containing protein
S28_scaffold_588_curated_13
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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11894..12547
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003751B38
Tax=RBG_16_Ignavibacteria_36_9_curated
S28_scaffold_588_curated_14
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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12646..13119
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00035F699A
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
S28_scaffold_588_curated_15
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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13196..13576
DNA (381bp) protein (127aa)
TIGR03987 family protein id=3831410 bin=GWF2_Bacteroidetes_41_31 species=Anaerofustis stercorihominis genus=Anaerofustis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
putative membrane protein
Tax=CG_Ignavi_02
S28_scaffold_588_curated_16
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(13586..14185)
DNA (600bp) protein (200aa)
ial:IALB_0205 msrA; Peptide methionine sulfoxide reductase; K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] id=717905 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
msrA; peptide methionine sulfoxide reductase
Displaying 16 items

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