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S28_scaffold_134_curated

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_134_curated_1
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

3..131
DNA (129bp) protein (43aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) RepID=B4SFE9_PELPB
Tax=RBG_16_Ignavibacteria_34_14_curated
S28_scaffold_134_curated_2
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

207..1172
DNA (966bp) protein (322aa)
Quinolinate synthase A n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z4W6_MELRP rbh
Quinolinate synthase rbh
Tax=RBG_16_Ignavibacteria_34_14_curated
S28_scaffold_134_curated_3
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

1350..4484
DNA (3135bp) protein (1045aa)
hypothetical protein n=2 Tax=Aminicenantes RepID=UPI000381A41F
response regulator receiver domain-containing protein
Tax=CG_Ignavi_02
S28_scaffold_134_curated_4
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

4743..5402
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI00035EC647
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Tax=CG_Ignavi_02
S28_scaffold_134_curated_5
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

5519..5875
DNA (357bp) protein (119aa)
Putative uncharacterized protein id=4365379 bin=GWF2_Melioribacter_38_21 species=Clostridium hylemonae genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
two-component system response regulator
Tax=CG_Ignavi_02
S28_scaffold_134_curated_6
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

5988..8552
DNA (2565bp) protein (855aa)
Transmembrane protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AHY7_IGNAJ rbh
transmembrane protein rbh
Transmembrane protein {ECO:0000313|EMBL:AFH48594.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_134_curated_7
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

8818..11067
DNA (2250bp) protein (750aa)
5'-Nucleotidase domain protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AIE4_IGNAJ
Coagulation factor protein rbh
Tax=RBG_16_Ignavibacteria_35_7_curated
S28_scaffold_134_curated_8
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

11244..12368
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AP17_IGNAJ
hypothetical protein
Tax=RBG_16_Ignavibacteria_35_7_curated
S28_scaffold_134_curated_9
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

12550..13242
DNA (693bp) protein (231aa)
NarL family signal transduction histidine kinase id=719750 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
NarL family signal transduction histidine kinase
Tax=GWC2_Ignavibacteria_rel_36_12_curated
S28_scaffold_134_curated_10
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(13450..13641)
DNA (192bp) protein (64aa)
Peptidase M23 id=3273463 bin=GWF2_Ignavibacteria_35_20 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Bifunctional xylanase/esterase
Tax=RBG_16_Ignavibacteria_36_9_curated
S28_scaffold_134_curated_11
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(13742..15808)
DNA (2067bp) protein (689aa)
Peptidase S8/S53 subtilisin kexin sedolisin n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ALG4_IGNAJ
peptidase S8/S53 subtilisin kexin sedolisin
Tax=CG_Ignavi_01
S28_scaffold_134_curated_12
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(15856..18501)
DNA (2646bp) protein (882aa)
hypothetical protein id=717507 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
hypothetical protein
Tax=CG_Ignavi_02
S28_scaffold_134_curated_13
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(18878..19438)
DNA (561bp) protein (187aa)
Uncharacterized protein id=3572737 bin=GWF2_Ignavibacteria_35_20 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
S28_scaffold_134_curated_14
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(19438..19863)
DNA (426bp) protein (142aa)
Uncharacterized protein id=3572733 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Tax=RBG_16_Ignavibacteria_34_14_curated
S28_scaffold_134_curated_15
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(20080..20769)
DNA (690bp) protein (230aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain id=3572728 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
LuxR family transcriptional regulator
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
S28_scaffold_134_curated_16
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(20766..21914)
DNA (1149bp) protein (383aa)
Sensor histidine kinase id=3572726 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria rbh
response regulator
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
S28_scaffold_134_curated_17
unknown

Not on your lists

comp(21898..22161)
DNA (264bp) protein (88aa)
hypothetical protein id=720331 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
S28_scaffold_134_curated_18
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

22336..22596
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZP14_9PLAN id=720330 bin=RAAC39 species=Blastopirellula marina genus=Blastopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RAAC39 organism_group=Ignavibacteria
Tax=RBG_16_Ignavibacteria_35_7_curated
S28_scaffold_134_curated_19
unknown

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22729..23031
DNA (303bp) protein (101aa)

This feature has no annotations

S28_scaffold_134_curated_20
unknown

Not on your lists

23061..23348
DNA (288bp) protein (96aa)

This feature has no annotations

S28_scaffold_134_curated_21
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

23554..25311
DNA (1758bp) protein (586aa)
Peptidase S8/S53 subtilisin kexin sedolisin n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AGE3_IGNAJ rbh
peptidase S8/S53 subtilisin kexin sedolisin rbh
Peptidase S8/S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:AFH48050.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_134_curated_22
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

25324..27078
DNA (1755bp) protein (585aa)
5'-Nucleotidase domain protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ALM1_IGNAJ
5'-nucleotidase
Tax=RBG_13_Caldithrix_44_9_curated
S28_scaffold_134_curated_23
unknown

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28097..29278
DNA (1182bp) protein (394aa)

This feature has no annotations

S28_scaffold_134_curated_24
unknown

Not on your lists

29307..30251
DNA (945bp) protein (315aa)

This feature has no annotations

S28_scaffold_134_curated_25
unknown

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30253..30534
DNA (282bp) protein (94aa)

This feature has no annotations

S28_scaffold_134_curated_26
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

30920..31225
DNA (306bp) protein (102aa)
MTH538 TIR-like domain (DUF1863) id=3737510 bin=GWF2_Ignavibacteria_35_20 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
MTH538 TIR-like domain (DUF1863).
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
S28_scaffold_134_curated_27
Lysinibacillus sphaericus, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31471..32586
DNA (1116bp) protein (372aa)
L-lysine 2,3-aminomutase n=1 Tax=Lysinibacillus sphaericus (strain C3-41) RepID=B1HQR4_LYSSC
L-lysine 2,3-aminomutase
Lysine 2,3-aminomutase {ECO:0000313|EMBL:EWH32759.1}; TaxID=1400869 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus sphaericus CBAM5.;"
S28_scaffold_134_curated_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32824..33642
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI00031E3C37
Amidinotransferase family protein {ECO:0000313|EMBL:AIY80276.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
amidinotransferase family protein
S28_scaffold_134_curated_29
unknown

Not on your lists

33756..34589
DNA (834bp) protein (278aa)

This feature has no annotations

S28_scaffold_134_curated_30
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34963..36918
DNA (1956bp) protein (652aa)
Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QF29_DESAH rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACN17530.1}; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium.;" source="Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2).;"
Displaying items 1-30 of 56 in total

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