ggKbase home page

S28_scaffold_238_curated

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_238_curated_trna_1
unknown

Not on your lists

123..196
DNA (74bp)
transferRNA Arg
S28_scaffold_238_curated_trna_2
unknown

Not on your lists

301..374
DNA (74bp)
transferRNA His
S28_scaffold_238_curated_trna_3
unknown

Not on your lists

478..549
DNA (72bp)
transferRNA Glu
S28_scaffold_238_curated_1
unknown

Not on your lists

833..2209
DNA (1377bp) protein (459aa)

This feature has no annotations

S28_scaffold_238_curated_2
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

2358..4946
DNA (2589bp) protein (863aa)
scl:sce5452 hypothetical protein id=720048 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
hypothetical protein rbh
Tax=RBG_16_Ignavibacteria_35_7_curated
S28_scaffold_238_curated_3
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

5050..6351
DNA (1302bp) protein (434aa)
aminotransferase (EC:2.6.1.-) rbh
Aminotransferase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AHC1_9PROT rbh
Tax=GWC2_Ignavibacteria_rel_36_12_curated
S28_scaffold_238_curated_4
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

6351..6728
DNA (378bp) protein (126aa)
Putative fluoride ion transporter CrcB n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AFH5_IGNAJ
membrane protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
S28_scaffold_238_curated_5
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

6733..7083
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z8Z4_MELRP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFN75620.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus (strain JCM 17771 / P3M-2).;"
S28_scaffold_238_curated_6
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

7351..10281
DNA (2931bp) protein (977aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00037B19FE rbh
TonB-dependent receptor rbh
Tax=GWC2_Ignavibacteria_rel_36_12_curated
S28_scaffold_238_curated_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10319..11989
DNA (1671bp) protein (557aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFU8_RHOM4 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACY49437.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
S28_scaffold_238_curated_8
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

12104..13744
DNA (1641bp) protein (547aa)
Putative aminopeptidase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AJR2_IGNAJ rbh
aminopeptidase rbh
Putative aminopeptidase {ECO:0000313|EMBL:AFH49219.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_238_curated_9
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

13745..14575
DNA (831bp) protein (277aa)
ial:IALB_1512 pstS; phosphate ABC transporter periplasmic protein; K02040 phosphate transport system substrate-binding protein id=720056 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
pstS; phosphate ABC transporter substrate-binding protein rbh
Tax=CG_Ignavi_01
S28_scaffold_238_curated_10
unknown

Not on your lists

14715..14915
DNA (201bp) protein (67aa)

This feature has no annotations

S28_scaffold_238_curated_11
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(14918..15757)
DNA (840bp) protein (280aa)
Sterol desaturase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AJR8_IGNAJ rbh
Sterol desaturase rbh
Sterol desaturase {ECO:0000313|EMBL:AFH49225.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_238_curated_12
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(15907..16797)
DNA (891bp) protein (297aa)
ial:IALB_1518 neuB; N-acetylneuraminate synthase; K01654 N-acetylneuraminate synthase [EC:2.5.1.56] id=720059 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
neuB; N-acetylneuraminate synthase rbh
N-acetylneuraminate synthase {ECO:0000313|EMBL:AFH49226.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_238_curated_13
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(16814..17356)
DNA (543bp) protein (181aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AJS0_IGNAJ
kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase {ECO:0000313|EMBL:AFH49227.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_238_curated_14
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(17341..18159)
DNA (819bp) protein (273aa)
Dehydrogenase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AJS1_IGNAJ rbh
dehydrogenase rbh
Dehydrogenase {ECO:0000313|EMBL:AFH49228.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_238_curated_15
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(18269..19603)
DNA (1335bp) protein (445aa)
Glutamate-1-semialdehyde aminotransferase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AJS2_IGNAJ rbh
hemL; glutamate-1-semialdehyde aminotransferase rbh
Glutamate-1-semialdehyde aminotransferase {ECO:0000313|EMBL:AFH49229.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_238_curated_16
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(19613..20422)
DNA (810bp) protein (270aa)
Polysaccharide biosynthesis protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AJS3_IGNAJ rbh
Polysaccharide biosynthesis protein rbh
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:AFH49230.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_238_curated_17
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(20425..21489)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AJS4_IGNAJ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFH49231.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_238_curated_18
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

21996..22943
DNA (948bp) protein (316aa)
Muramoyltetrapeptide carboxypeptidase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AJS5_IGNAJ rbh
ldcA; Muramoyltetrapeptide carboxypeptidase rbh
Muramoyltetrapeptide carboxypeptidase {ECO:0000313|EMBL:AFH49232.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
Displaying 21 items

View Taxonomy