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S28_scaffold_26_curated

Search features with annotation key words

Displaying items 1-30 of 205 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_26_curated_1
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

1..417
DNA (417bp) protein (139aa)
5'-nucleotidase id=719858 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
S28_scaffold_26_curated_2
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

495..1316
DNA (822bp) protein (274aa)
hypothetical protein
Uncharacterized protein id=3891814 bin=GWA2_Ignavibacteria_55_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
S28_scaffold_26_curated_3
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

comp(1758..2963)
DNA (1206bp) protein (402aa)
Subtilisin-like serine protease id=1250174 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
5'-nucleotidase
Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
S28_scaffold_26_curated_4
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

comp(3177..3659)
DNA (483bp) protein (161aa)
Globin id=4763451 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
truncated hemoglobin
Tax=RBG_16_Caldithrix_48_16_curated
S28_scaffold_26_curated_5
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(3956..6157)
DNA (2202bp) protein (734aa)
sgn:SGRA_0350 vault protein, inter-alpha-trypsin domain-containing protein; K07114 uncharacterized protein id=719140 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
vault protein, inter-alpha-trypsin domain-containing protein rbh
Tax=RBG_13_Ignavibacteria_36_8_curated
S28_scaffold_26_curated_6
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(6287..7408)
DNA (1122bp) protein (374aa)
mrs:Murru_1892 von Willebrand factor type A id=719139 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
von Willebrand factor type A rbh
Tax=RBG_13_Ignavibacteria_36_8_curated
S28_scaffold_26_curated_7
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(7516..8334)
DNA (819bp) protein (273aa)
ial:IALB_1434 vanX; D-alanyl-D-alanine dipeptidase; K08641 D-alanyl-D-alanine dipeptidase [EC:3.4.13.22] id=719138 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
D-alanyl-D-alanine dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671}; Short=D-Ala-D-Ala dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; EC=3.4.13.22 {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
vanX; D-alanyl-D-alanine dipeptidase rbh
S28_scaffold_26_curated_8
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(8353..9846)
DNA (1494bp) protein (498aa)
Multiheme cytochrome with 7 heme-binding motifs, likely part of a dehydrogenase enzyme or pathway; non-cytoplasmic, 3 transmembrane domains
Cytochrome c family protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AJ58_IGNAJ rbh
cytochrome c family protein rbh
Cytochrome c family protein {ECO:0000313|EMBL:AFH49015.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_26_curated_9
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(9928..12123)
DNA (2196bp) protein (732aa)
Multiheme cytochrome with 13 heme-binding motifs, likely a dehydrogenase protein. 5 transmembrane domains, has signal peptide.
Formate dehydrogenase-like protein cytochrome b subunit n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AJ59_IGNAJ rbh
Formate dehydrogenase-like protein cytochrome b subunit {ECO:0000313|EMBL:AFH49016.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
Formate dehydrogenase-like protein cytochrome b subunit rbh
S28_scaffold_26_curated_10
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(12156..12500)
DNA (345bp) protein (115aa)
hypothetical protein id=719134 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH49017.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_26_curated_11
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(12946..13305)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AJ61_IGNAJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH49018.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_26_curated_12
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(13572..14927)
DNA (1356bp) protein (452aa)
ial:IALB_1309 NtrC family response regulator id=719132 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
NtrC family response regulator rbh
NtrC family response regulator {ECO:0000313|EMBL:AFH49019.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_26_curated_13
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(14944..16383)
DNA (1440bp) protein (480aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
Signal transduction histidine kinase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AJ63_IGNAJ rbh
Signal transduction histidine kinase rbh
S28_scaffold_26_curated_14
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

16561..17319
DNA (759bp) protein (253aa)
Putative amidohydrolase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AJ65_IGNAJ rbh
amidohydrolase rbh
Tax=CG_Ignavi_02
S28_scaffold_26_curated_15
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17316..18434)
DNA (1119bp) protein (373aa)
UniRef90_UPI0002483C16 hypothetical protein ACCM5_21039 n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002483C16 id=1247280 bin=RBG9 species=Acaryochloris sp. CCMEE 5410 genus=Acaryochloris taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP55664.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
S28_scaffold_26_curated_16
unknown

Not on your lists

comp(18640..19104)
DNA (465bp) protein (155aa)

This feature has no annotations

S28_scaffold_26_curated_17

Not on your lists

comp(19128..19499)
DNA (372bp) protein (124aa)
hypothetical protein id=720042 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Uncharacterized protein {ECO:0000313|EMBL:AGC72457.1}; TaxID=1256577 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_493.;"
hypothetical protein
S28_scaffold_26_curated_18
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(19581..20432)
DNA (852bp) protein (284aa)
UniRef90_K4ME56 Prenyltransferase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4ME56_9EURY id=717488 bin=RAAC39 species=Methanolobus psychrophilus genus=Methanolobus taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=RAAC39 organism_group=Ignavibacteria rbh
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase rbh
Tax=BJP_IG2102_Ignavibacteriales_35_8
S28_scaffold_26_curated_19
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20526..21986)
DNA (1461bp) protein (487aa)
Penicillin-binding protein, beta-lactamase class C n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3Z016_AEQSU rbh
penicillin-binding protein, beta-lactamase class C rbh
Penicillin-binding protein, beta-lactamase class C {ECO:0000313|EMBL:AFL82584.1}; Flags: Precursor;; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
S28_scaffold_26_curated_20
unknown

Not on your lists

comp(22056..22550)
DNA (495bp) protein (165aa)

This feature has no annotations

S28_scaffold_26_curated_21
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

22963..24429
DNA (1467bp) protein (489aa)
MEROPS family M64 IgA peptidase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ALL5_IGNAJ rbh
MEROPS family M64 IgA peptidase rbh
MEROPS family M64 IgA peptidase {ECO:0000313|EMBL:AFH49872.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_26_curated_22
Streptomyces natalensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24624..27479
DNA (2856bp) protein (952aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000366E885 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIZ17216.1}; TaxID=1240678 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces natalensis ATCC 27448.;"
LuxR family transcriptional regulator
S28_scaffold_26_curated_23
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(27504..28334)
DNA (831bp) protein (277aa)
Transcriptional regulator, AraC family n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JL07_9BACT
Transcriptional regulator {ECO:0000313|EMBL:AHM63407.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
transcriptional regulator
S28_scaffold_26_curated_24
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(28865..29284)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JKM8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR69486.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
cupin domain-containing protein
S28_scaffold_26_curated_25
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

29546..30637
DNA (1092bp) protein (364aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Rivularia sp. PCC 7116 RepID=K9RAV6_9CYAN rbh
methylase rbh
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AFY54618.1}; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
S28_scaffold_26_curated_26
unknown

Not on your lists

30684..30830
DNA (147bp) protein (49aa)

This feature has no annotations

S28_scaffold_26_curated_27
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(31026..31916)
DNA (891bp) protein (297aa)
Uncharacterized protein id=4580888 bin=GWF2_Melioribacter_38_21 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
peptidase S8/S53 subtilisin kexin sedolisin
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
S28_scaffold_26_curated_28
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(31932..33632)
DNA (1701bp) protein (567aa)
hypothetical protein id=720166 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH47928.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_26_curated_29
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(33827..35344)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AM10_IGNAJ
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
S28_scaffold_26_curated_30
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

35477..36250
DNA (774bp) protein (258aa)
AMP nucleosidase id=4020119 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria rbh
amn; AMP nucleosidase rbh
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
Displaying items 1-30 of 205 in total

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