ggKbase home page

S28_scaffold_1137_curated

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_1137_curated_1
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2..103
DNA (102bp) protein (34aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=1434114 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei LYC.;"
Serine--tRNA ligase n=2 Tax=Methanosarcina mazei RepID=SYS_METMA
S28_scaffold_1137_curated_2
Methanosarcina sp. 2.H.A.1B.4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(391..2367)
DNA (1977bp) protein (659aa)
Glucoamylase (EC:3.2.1.3)
Glucan 1,4-alpha-glucosidase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TIU1_METAC rbh
Glucan 1,4-alpha-glucosidase {ECO:0000313|EMBL:KKG13168.1}; TaxID=1483600 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.A.1B.4.;"
S28_scaffold_1137_curated_3
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2364..3170)
DNA (807bp) protein (269aa)
Uncharacterized protein n=2 Tax=Methanosarcina mazei RepID=M1Q1Z3_METMZ rbh
Uncharacterized protein {ECO:0000313|EMBL:AKB77016.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
hypothetical protein rbh
S28_scaffold_1137_curated_4
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3222..4418)
DNA (1197bp) protein (399aa)
Alpha-amylase {ECO:0000313|EMBL:AKB77017.1}; EC=3.2.1.1 {ECO:0000313|EMBL:AKB77017.1};; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
alpha-amylase (EC:3.2.1.1) rbh
Alpha-amylase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PYJ9_METMA rbh
S28_scaffold_1137_curated_5
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4415..5551)
DNA (1137bp) protein (379aa)
Alpha-amylase n=2 Tax=Methanosarcina mazei RepID=M1Q7Y4_METMZ rbh
Alpha-amylase rbh
Alpha-amylase {ECO:0000313|EMBL:AGF96288.1}; TaxID=1236903 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei Tuc01.;"
S28_scaffold_1137_curated_6
Methanosarcina sp. 1.H.T.1A.1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6131..6910)
DNA (780bp) protein (260aa)
Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=PURL_METAC
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:KKH95635.1}; TaxID=1483602 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.T.1A.1.;"
Displaying 6 items

View Taxonomy