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S28_scaffold_557_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_557_curated_1
Methanosarcina sp. 2.H.T.1A.8, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3..563)
DNA (561bp) protein (187aa)
Putative ABC transporter ATP-binding protein MA_4342 n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Y4342_METAC rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKG22673.1}; TaxID=1483598 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.8.;"
ATPase component BioM of energizing module of biotin ECF transporter
S28_scaffold_557_curated_2
Methanosarcina sp. 2.H.T.1A.8, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(539..1363)
DNA (825bp) protein (275aa)
Energy-coupling factor transporter ATP-binding protein EcfA n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=ECFA_METAC rbh
Cobalt transporter ATP-binding subunit {ECO:0000313|EMBL:KKG22674.1}; TaxID=1483598 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.8.;"
ATPase component BioM of energizing module of biotin ECF transporter
S28_scaffold_557_curated_3
Methanosarcina lacustris, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1589..2152)
DNA (564bp) protein (188aa)
Biotin synthesis BioY protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TI17_METAC rbh
Substrate-specific component BioY of biotin ECF transporter
Substrate-specific component BioY of biotin ECF transporter {ECO:0000313|EMBL:AKB76106.1}; TaxID=1434111 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina lacustris Z-7289.;"
S28_scaffold_557_curated_trna_1
unknown

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2594..2668
DNA (75bp)
transferRNA Arg
S28_scaffold_557_curated_4
unknown

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comp(2969..3373)
DNA (405bp) protein (135aa)

This feature has no annotations

S28_scaffold_557_curated_5
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3459..3929
DNA (471bp) protein (157aa)
acetyltransferase (EC:2.3.1.1)
Amino-acid acetyltransferase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PY29_METMA
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AKB63460.1}; TaxID=213585 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei S-6.;"
S28_scaffold_557_curated_6
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4161..4826
DNA (666bp) protein (222aa)
Iron dependent repressor n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TI19_METAC rbh
iron dependent repressor rbh
Iron dependent repressor {ECO:0000313|EMBL:AAM07681.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /; C2A).;"
S28_scaffold_557_curated_7
Methanosarcina sp. 1.H.A.2.2, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4876..6855
DNA (1980bp) protein (660aa)
Ferrous iron transport protein B n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TI20_METAC rbh
Iron transporter {ECO:0000313|EMBL:KKH50672.1}; TaxID=1483601 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.A.2.2.;"
feoB; ferrous iron transport protein B rbh
S28_scaffold_557_curated_8
Methanosarcina sp. 2.H.T.1A.8, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7309..7551
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TI21_METAC
Uncharacterized protein {ECO:0000313|EMBL:KKG22679.1}; TaxID=1483598 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.8.;"
hypothetical protein
S28_scaffold_557_curated_9
Methanosarcina sp. 2.H.T.1A.8, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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8528..9382
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TI22_METAC rbh
Uncharacterized protein {ECO:0000313|EMBL:KKG22680.1}; TaxID=1483598 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.8.;"
hypothetical protein
S28_scaffold_557_curated_10
Methanosarcina sp. 1.H.T.1A.1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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9437..10996
DNA (1560bp) protein (520aa)
Chromosome partition protein Smc n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TI23_METAC
Chromosome segregation protein {ECO:0000313|EMBL:KKH99831.1}; TaxID=1483602 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.T.1A.1.;"
smc1; chromosome segregation protein
Displaying 11 items

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