ggKbase home page

S28_scaffold_1512_curated

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_1512_curated_1
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3..317)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TQM0_METAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM04934.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /; C2A).;"
S28_scaffold_1512_curated_2
unknown

Not on your lists

777..974
DNA (198bp) protein (66aa)

This feature has no annotations

S28_scaffold_1512_curated_3
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


1211..1432
DNA (222bp) protein (74aa)
30S ribosomal protein S28e n=2 Tax=Methanosarcina mazei RepID=RS28_METMA
30S ribosomal protein S28e
30S ribosomal protein S28e {ECO:0000256|HAMAP-Rule:MF_00292}; TaxID=1434113 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei C16.;"
S28_scaffold_1512_curated_4
Methanosarcina sp. 2.H.T.1A.8, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1677..2126
DNA (450bp) protein (150aa)
Nucleoside diphosphate kinase {ECO:0000313|EMBL:KKG21186.1}; EC=2.7.4.6 {ECO:0000313|EMBL:KKG21186.1};; TaxID=1483598 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.8.;"
Nucleoside diphosphate kinase n=2 Tax=Methanosarcina acetivorans RepID=NDK_METAC
ndk; nucleoside diphosphate kinase
S28_scaffold_1512_curated_5
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2282..4057
DNA (1776bp) protein (592aa)
Probable translation initiation factor IF-2 n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=IF2P_METMA rbh
Probable translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
translation initiation factor IF-2 rbh
S28_scaffold_1512_curated_6
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


4208..4624
DNA (417bp) protein (139aa)
30S ribosomal protein S6e n=2 Tax=Methanosarcina mazei RepID=RS6E_METMA
30S ribosomal protein S6
30S ribosomal protein S6e {ECO:0000256|HAMAP-Rule:MF_00512, ECO:0000256|SAAS:SAAS00018829}; TaxID=1236903 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei Tuc01.;"
S28_scaffold_1512_curated_7
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5404..5682)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q468V5_METBF
Uncharacterized protein {ECO:0000313|EMBL:AKB79335.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
hypothetical protein
Displaying 7 items

View Taxonomy