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S28_scaffold_1519_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_1519_curated_1
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(225..587)
DNA (363bp) protein (121aa)
Carboxymuconolactone decarboxylase n=2 Tax=Methanosarcina RepID=Q465A8_METBF
Protein-disulfide reductase {ECO:0000313|EMBL:AKB67477.1}; TaxID=1434114 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei LYC.;"
Protein-disulfide reductase
S28_scaffold_1519_curated_2
Methanosarcina sp. WWM596, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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768..1322
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PZX2_METMA
Uncharacterized protein {ECO:0000313|EMBL:AKB17834.1}; TaxID=1434103 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WWM596.;"
hypothetical protein
S28_scaffold_1519_curated_3
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1602..1970)
DNA (369bp) protein (123aa)
Ferredoxin n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PZX3_METMA
ferredoxin
Ferredoxin {ECO:0000313|EMBL:AKB64132.1}; TaxID=213585 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei S-6.;"
S28_scaffold_1519_curated_4
Methanosarcina sp. WWM596, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2039..2521)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TL79_METAC
Uncharacterized protein {ECO:0000313|EMBL:AKB17832.1}; TaxID=1434103 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WWM596.;"
hypothetical protein
S28_scaffold_1519_curated_5
Methanosarcina sp. 1.H.T.1A.1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2772..3008)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1QFN0_METMZ
Uncharacterized protein {ECO:0000313|EMBL:KKH92965.1}; TaxID=1483602 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.T.1A.1.;"
hypothetical protein
S28_scaffold_1519_curated_6
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3054..3392)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TL77_METAC
Uncharacterized protein {ECO:0000313|EMBL:AKB77573.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
hypothetical protein
S28_scaffold_1519_curated_7
Methanosarcina sp. 2.H.T.1A.3, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4567..4923
DNA (357bp) protein (119aa)
Transcriptional regulator, MarR family n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q465B6_METBF
HxlR family transcriptional regulator {ECO:0000313|EMBL:KKG17581.1}; TaxID=1483597 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.3.;"
Transcriptional regulator, HxlR family
S28_scaffold_1519_curated_8
Methanosarcina sp. WH1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5241..5702
DNA (462bp) protein (154aa)
Acetyl-CoA synthetase (ADP-forming) alpha chain {ECO:0000313|EMBL:AKB21179.1}; EC=6.2.1.13 {ECO:0000313|EMBL:AKB21179.1};; TaxID=1434102 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WH1.;"
Acetate-CoA ligase (ADP-forming), subunit alpha n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TL72_METAC
acdA; acetate-CoA ligase subunit beta
Displaying 8 items

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