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S28_scaffold_601_curated

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_601_curated_1
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1..1107)
DNA (1107bp) protein (369aa)
Oxidoreductase, ALDO/KETO reductase family n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PVL5_METMA rbh
Aldo/keto reductase {ECO:0000313|EMBL:AKB79899.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
aldo/keto reductase rbh
S28_scaffold_601_curated_2
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1455..2420
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1QK66_METMZ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AKB68932.1}; TaxID=1434114 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei LYC.;"
S28_scaffold_601_curated_3
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2417..3607
DNA (1191bp) protein (397aa)
Glycosyltransferase n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1QAX3_METMZ rbh
N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein {ECO:0000313|EMBL:KKH73106.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina frisia).;"
Glycosyltransferase rbh
S28_scaffold_601_curated_4
Methanosarcina sp. 2.H.T.1A.8, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3728..4060
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BV0_METBF
Gamma-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:KKG26059.1}; TaxID=1483598 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.8.;"
hypothetical protein
S28_scaffold_601_curated_5
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4240..5190)
DNA (951bp) protein (317aa)
Transporter n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PVL9_METMA rbh
Radical SAM domain protein {ECO:0000313|EMBL:AKB79904.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
transporter rbh
S28_scaffold_601_curated_6
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5297..6127)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BV3_METBF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB55980.1}; TaxID=1434108 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri MS.;"
S28_scaffold_601_curated_7
Methanosarcina sp. 2.H.A.1B.4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6754..7824
DNA (1071bp) protein (357aa)
Tungsten-containing aldehyde ferredoxin oxidoreductase cofactor modifying protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TSK2_METAC rbh
Aldehyde:ferredoxin oxidoreductase {ECO:0000313|EMBL:KKG12730.1}; TaxID=1483600 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.A.1B.4.;"
tungsten-containing aldehyde ferredoxin oxidoreductase cofactor modifying protein rbh
S28_scaffold_601_curated_8
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8020..8973
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TSK3_METAC rbh
Uncharacterized protein {ECO:0000313|EMBL:AKB79907.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
hypothetical protein
S28_scaffold_601_curated_9
Methanosarcina sp. 1.H.A.2.2, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9043..10020
DNA (978bp) protein (326aa)
Arginine deiminase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TSK4_METAC rbh
Arginine deiminase {ECO:0000313|EMBL:KKH46716.1}; TaxID=1483601 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.A.2.2.;"
arcA; arginine deiminase rbh
S28_scaffold_601_curated_10
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10068..10493)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TSK5_METAC
ubiA; prenyltransferase
Uncharacterized protein {ECO:0000313|EMBL:AAM04230.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /; C2A).;"
S28_scaffold_601_curated_11
unknown

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10919..11050
DNA (132bp) protein (44aa)

This feature has no annotations

S28_scaffold_601_curated_12
Methanosarcina sp. 2.H.T.1A.8, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11200..12093)
DNA (894bp) protein (298aa)
4-hydroxybenzoate octaprenyltransferase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TSK6_METAC rbh
Prenyltransferase {ECO:0000313|EMBL:KKG26064.1}; TaxID=1483598 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.8.;"
hypothetical protein
Displaying 12 items

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