ggKbase home page

S28_scaffold_1547_curated

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_1547_curated_1
Methanosarcina lacustris, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3..458)
DNA (456bp) protein (152aa)
archaeosine tRNA-ribosyltransferase type 2 short (EC:2.4.2.-)
Archaeosine tRNA-ribosyltransferase type 2 short {ECO:0000313|EMBL:AKB75734.1}; EC=2.4.2.- {ECO:0000313|EMBL:AKB75734.1};; TaxID=1434111 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina lacustris Z-7289.;"
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PVC2_METMA rbh
S28_scaffold_1547_curated_2
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

883..1284
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TS79_METAC
Uncharacterized protein {ECO:0000313|EMBL:AKB69020.1}; TaxID=1434114 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei LYC.;"
hypothetical protein
S28_scaffold_1547_curated_3
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1390..2625)
DNA (1236bp) protein (412aa)
Aminotransferase class I and II n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1QKG8_METMZ rbh
Aromatic amino acid aminotransferase {ECO:0000313|EMBL:KKH23027.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina frisia).;"
Aminotransferase class I and II rbh
S28_scaffold_1547_curated_4
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2714..3205)
DNA (492bp) protein (164aa)
Leucine responsive regulatory protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TS81_METAC rbh
lrp; leucine responsive regulatory protein rbh
Leucine responsive regulatory protein {ECO:0000313|EMBL:AAM04357.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /; C2A).;"
S28_scaffold_1547_curated_5
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3276..3653)
DNA (378bp) protein (126aa)
30S ribosomal protein S8e n=2 Tax=Methanosarcina mazei RepID=RS8E_METMA
30S ribosomal protein S8e {ECO:0000256|HAMAP-Rule:MF_00029, ECO:0000256|SAAS:SAAS00018121}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
SSU ribosomal protein S8e
S28_scaffold_1547_curated_6
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4198..4524
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TS83_METAC
Uncharacterized protein {ECO:0000313|EMBL:AKB35441.1}; TaxID=1434118 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae C2J.;"
hypothetical protein
S28_scaffold_1547_curated_7
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4777..5463
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TS84_METAC rbh
Uncharacterized protein {ECO:0000313|EMBL:AKB79795.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
hypothetical protein rbh
Displaying 7 items

View Taxonomy