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S28_scaffold_490_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_490_curated_1
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1..1755
DNA (1755bp) protein (585aa)
SWF/SNF family helicase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PWU7_METMA rbh
Helicase SNF2 {ECO:0000313|EMBL:KKG53718.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina frisia).;"
SWF/SNF family helicase rbh
S28_scaffold_490_curated_2
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1757..2692
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TU83_METAC rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AKB30844.1}; TaxID=1434119 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae HI350.;"
S28_scaffold_490_curated_3
Methanosarcina sp. 2.H.A.1B.4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2721..2984)
DNA (264bp) protein (88aa)
Iron-dependent repressor n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PWU5_METMA
Uncharacterized protein {ECO:0000313|EMBL:KKG11470.1}; TaxID=1483600 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.A.1B.4.;"
FeoA domain protein
S28_scaffold_490_curated_4
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3142..5271)
DNA (2130bp) protein (710aa)
Ferrous iron transport protein B n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E9X7_METMS rbh
Ferrous iron transport protein B {ECO:0000313|EMBL:AKB80410.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
Ferrous iron transport protein B
S28_scaffold_490_curated_5
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5581..6378)
DNA (798bp) protein (266aa)
Conserved protein n=2 Tax=Methanosarcina mazei RepID=Q8PWU2_METMA rbh
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AKB80409.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
hypothetical protein rbh
S28_scaffold_490_curated_6
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6766..7026
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TU81_METAC
RNA-binding protein YhbY {ECO:0000313|EMBL:AKB80408.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
hypothetical protein
S28_scaffold_490_curated_7
Methanosarcina sp. WH1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7691..10468
DNA (2778bp) protein (926aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017576}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017588};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1434102 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WH1.;"
alaS; alanyl-tRNA synthetase (EC:6.1.1.7) rbh
Alanine--tRNA ligase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=SYA_METAC rbh
S28_scaffold_490_curated_8
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(10715..11836)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TU78_METAC rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAM03648.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /; C2A).;"
S28_scaffold_490_curated_9
Ixodes ricinus, Ixodes, Ixodida, Acari, Arthropoda, Metazoa

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comp(11890..12051)
DNA (162bp) protein (54aa)
Putative conserved plasma membrane protein (Fragment) n=1 Tax=Ixodes ricinus RepID=V5IK84_IXORI
Putative conserved plasma membrane protein {ECO:0000313|EMBL:JAB84336.1}; Flags: Fragment;; TaxID=34613 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes.;" source="Ixodes ricinus (Common tick).;"
Displaying 9 items

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