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S28_scaffold_962_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_962_curated_1
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2..1174)
DNA (1173bp) protein (391aa)
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PUW9_METMA rbh
Kef-type K+ transport systems (NAD-binding component fused to domain related to exopolyphosphatase) {ECO:0000313|EMBL:AKB79602.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
hypothetical protein rbh
S28_scaffold_962_curated_2
Methanosarcina sp. 2.H.T.1A.8, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1909..3411
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TRK5_METAC rbh
Hydroxyethylthiazole kinase {ECO:0000313|EMBL:KKG22940.1}; TaxID=1483598 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.8.;"
hypothetical protein rbh
S28_scaffold_962_curated_3
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3569..3754
DNA (186bp) protein (62aa)
Uncharacterized protein n=2 Tax=Methanosarcina mazei RepID=M1QKS2_METMZ
Uncharacterized protein {ECO:0000313|EMBL:AKB79604.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
hypothetical protein
S28_scaffold_962_curated_4
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3930..4445
DNA (516bp) protein (172aa)
Probable cyclic pyranopterin monophosphate synthase accessory protein n=2 Tax=Methanosarcina mazei RepID=MOAC_METMA
Probable cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
Molybdenum cofactor biosynthesis enzyme
S28_scaffold_962_curated_5
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4458..5357
DNA (900bp) protein (300aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1) rbh
Ribose-phosphate pyrophosphokinase {ECO:0000255|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000255|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000255|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000255|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000255|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000255|HAMAP-Rule:MF_00583}; Short=P-Rib-PP synthase {ECO:0000255|HAMAP-Rule:MF_00583};; Short=PRPP synthase {ECO:0000255|HAMAP-Rule:MF_00583};; Short=PRPPase {ECO:0000255|HAMAP-Rule:MF_00583};; TaxID=192952 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 /; JCM 11833 / OCM 88) (Methanosarcina frisia).;"
Ribose-phosphate pyrophosphokinase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=KPRS_METMA rbh
S28_scaffold_962_curated_6
unknown

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6036..6275
DNA (240bp) protein (80aa)

This feature has no annotations

S28_scaffold_962_curated_7
Methanosarcina lacustris, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6336..7154
DNA (819bp) protein (273aa)
Uncharacterized protein n=2 Tax=Methanosarcina mazei RepID=M1PYZ7_METMZ rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB73975.1}; TaxID=1434111 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina lacustris Z-7289.;"
S28_scaffold_962_curated_8
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7885..8586
DNA (702bp) protein (234aa)
Conserved protein n=2 Tax=Methanosarcina mazei RepID=Q8PUY2_METMA rbh
Uncharacterized protein {ECO:0000313|EMBL:AKB62358.1}; TaxID=1434115 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei SarPi.;"
hypothetical protein rbh
Displaying 8 items

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