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S28_scaffold_1368_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_1368_curated_1
Methanosarcina sp. WH1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(252..1322)
DNA (1071bp) protein (357aa)
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase {ECO:0000256|HAMAP-Rule:MF_01163}; EC=6.3.4.23 {ECO:0000256|HAMAP-Rule:MF_01163};; 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate--formate ligase {ECO:0000256|HAMAP-Rule:MF_01163}; TaxID=1434102 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WH1.;"
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase n=2 Tax=Methanosarcina acetivorans RepID=PURP_METAC rbh
Phosphoribosylaminoimidazolecarboxamide formyltransferase(alternate form)
S28_scaffold_1368_curated_2
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1522..2472
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TU66_METAC rbh
Putative transcriptional regulators {ECO:0000313|EMBL:AKB80395.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
hypothetical protein rbh
S28_scaffold_1368_curated_3
Methanosarcina sp. WH1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2484..3293
DNA (810bp) protein (270aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1434102 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WH1.;"
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) rbh
tRNA pseudouridine synthase A n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=TRUA_METAC rbh
S28_scaffold_1368_curated_4
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3435..4505)
DNA (1071bp) protein (357aa)
N2-methylguanosine tRNA methyltransferase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TU64_METAC rbh
tRNA-(G10-N2) methyltransferase {ECO:0000313|EMBL:AKB80393.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
trmL; N2-methylguanosine tRNA methyltransferase rbh
S28_scaffold_1368_curated_5
Methanosarcina sp. 1.H.A.2.2, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4924..5211)
DNA (288bp) protein (96aa)
Uncharacterized protein n=2 Tax=Methanosarcina mazei RepID=M1P8Y2_METMZ
Uncharacterized protein {ECO:0000313|EMBL:KKH46389.1}; TaxID=1483601 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.A.2.2.;"
Hypothetical protein
S28_scaffold_1368_curated_6
Methanosarcina sp. 2.H.A.1B.4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5257..6102)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PWS8_METMA rbh
Uncharacterized protein {ECO:0000313|EMBL:KKG11455.1}; TaxID=1483600 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.A.1B.4.;"
hypothetical protein
Displaying 6 items

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