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S28_scaffold_374_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_374_curated_1
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(3..2426)
DNA (2424bp) protein (808aa)
Putative uncharacterized protein id=3974224 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
hypothetical protein rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_374_curated_2
unknown

Not on your lists

2569..3138
DNA (570bp) protein (190aa)

This feature has no annotations

S28_scaffold_374_curated_3
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(3492..5750)
DNA (2259bp) protein (753aa)
Major facilitator superfamily MFS_1 id=2829262 bin=GWB1_Spirochaetales_60_80 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes rbh
major facilitator superfamily protein rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_374_curated_4
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(5767..7158)
DNA (1392bp) protein (464aa)
MATE efflux family protein id=3678877 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
MATE efflux family protein rbh
Tax=GWB1_Spirochaetes_59_5_curated
S28_scaffold_374_curated_5
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

7258..7959
DNA (702bp) protein (234aa)
Fructose-2,6-bisphosphatase id=3836747 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
fructose-2,6-bisphosphatase
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_374_curated_6
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(7936..8625)
DNA (690bp) protein (230aa)
Pseudouridine synthase id=3836749 bin=GWB1_Spirochaetes_59_5 species=unknown genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
pseudouridine synthase
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_374_curated_7
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(8759..9814)
DNA (1056bp) protein (352aa)
TRAP transporter, 4TM/12TM fusion protein id=3836750 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
TRAP transporter, 4TM/12TM fusion protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_374_curated_8
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(10946..11425)
DNA (480bp) protein (160aa)
Uncharacterized protein id=3836778 bin=GWB1_Spirochaetes_59_5 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
Tax=GWB1_Spirochaetes_59_5_curated
S28_scaffold_374_curated_9
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(11394..12374)
DNA (981bp) protein (327aa)
TRAP transporter solute receptor, TAXI family id=2637756 bin=GWF1_Spirochaetes_60_12 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes rbh
TRAP transporter solute receptor, TAXI family rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_374_curated_10
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(12501..13070)
DNA (570bp) protein (190aa)
Putative uncharacterized protein id=3836781 bin=GWB1_Spirochaetes_59_5 species=Treponema succinifaciens genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
Tax=GWB1_Spirochaetes_59_5_curated
S28_scaffold_374_curated_11
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

13252..14331
DNA (1080bp) protein (360aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.13)
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:AEJ20476.1}; EC=2.7.7.13 {ECO:0000313|EMBL:AEJ20476.1};; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
Mannose-1-phosphate guanylyltransferase n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F3V7_SPICH
S28_scaffold_374_curated_12
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(14388..14990)
DNA (603bp) protein (201aa)
Methyl-accepting chemotaxis sensory transducer id=2986892 bin=GWF1_Spirochaetes_60_12 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
methyl-accepting chemotaxis sensory transducer
Tax=GWB1_Spirochaetes_60_80_curated
S28_scaffold_374_curated_13
unknown

Not on your lists

15315..16157
DNA (843bp) protein (281aa)

This feature has no annotations

S28_scaffold_374_curated_14
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(16299..16856)
DNA (558bp) protein (186aa)
FAD dependent oxidoreductase id=2857674 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
FAD-dependent dehydrogenase
Tax=GWB1_Spirochaetes_59_5_curated
Displaying 14 items

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