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S28_scaffold_287_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_287_curated_1
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

3..638
DNA (636bp) protein (212aa)
Cell wall hydrolase/autolysin id=2769260 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
cell wall hydrolase/autolysin
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_287_curated_2
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

635..1165
DNA (531bp) protein (177aa)
id=2885998 bin=GWF1_Spirochaetes_60_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_287_curated_3
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

1284..2366
DNA (1083bp) protein (361aa)
Flagellar filament outer layer protein FlaA id=2769262 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
flagellar filament outer layer protein FlaA rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_287_curated_4
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

2559..3713
DNA (1155bp) protein (385aa)
RelA/SpoT domain protein id=2769263 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
RelA/SpoT domain-containing protein rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_287_curated_trna_1
unknown

Not on your lists

3770..3841
DNA (72bp)
transferRNA Glu
S28_scaffold_287_curated_5
unknown

Not on your lists

4350..4823
DNA (474bp) protein (158aa)

This feature has no annotations

S28_scaffold_287_curated_6
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

4986..5372
DNA (387bp) protein (129aa)
Thioredoxin id=2886008 bin=GWF1_Spirochaetes_60_12 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
thioredoxin
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_287_curated_7
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(5359..6537)
DNA (1179bp) protein (393aa)
Probable tRNA sulfurtransferase id=2769404 bin=GWB1_Spirochaetes_59_5 species=Treponema sp. JC4 genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
tRNA sulfurtransferase rbh
Tax=GWB1_Spirochaetes_59_5_curated
S28_scaffold_287_curated_8
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(6556..7707)
DNA (1152bp) protein (384aa)
Cysteine desulfurase id=1282506 bin=GWE1_Spirochaete_60_18 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes rbh
class V aminotransferase rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_287_curated_9
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(7761..8093)
DNA (333bp) protein (111aa)
Ferredoxin thioredoxin reductase beta chain n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EXP8_SPICH
ferredoxin thioredoxin reductase subunit beta
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_287_curated_10
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(8096..8395)
DNA (300bp) protein (100aa)
Glutaredoxin id=2886045 bin=GWF1_Spirochaetes_60_12 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
glutaredoxin
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_287_curated_11
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(8500..9900)
DNA (1401bp) protein (467aa)
deoxyribodipyrimidine photo-lyase type II (EC:4.1.99.3) rbh
hypothetical protein n=1 Tax=Deinococcus aquatilis RepID=UPI00035F2E37 rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_287_curated_12
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

10111..11808
DNA (1698bp) protein (566aa)
Elongation factor 4 id=2885814 bin=GWF1_Spirochaetes_60_12 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes rbh
GTP-binding protein lepA rbh
Tax=GWB1_Spirochaetes_60_80_curated
S28_scaffold_287_curated_13
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(11873..13465)
DNA (1593bp) protein (531aa)
Putative uncharacterized protein id=3694872 bin=GWB1_Spirochaetes_59_5 species=Treponema brennaborense genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
hypothetical protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_287_curated_14
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(13474..15006)
DNA (1533bp) protein (511aa)
PpiC-type peptidyl-prolyl cis-trans isomerase id=3694869 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
PpiC-type peptidyl-prolyl cis-trans isomerase rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_287_curated_15
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(15204..17396)
DNA (2193bp) protein (731aa)
Diguanylate cyclase with TPR repeats id=3694864 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
diguanylate cyclase with TPR repeats rbh
Tax=GWB1_Spirochaetes_59_5_curated
S28_scaffold_287_curated_16
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

17523..18050
DNA (528bp) protein (176aa)
ATP/cobalamin adenosyltransferase id=3694861 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
ATP--cobalamin adenosyltransferase
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_287_curated_17
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(18071..19177)
DNA (1107bp) protein (369aa)
Flagellar motor switch protein FliG id=3694858 bin=GWB1_Spirochaetes_59_5 species=Treponema brennaborense genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
flagellar motor switch protein FliG, C-terminal
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
Displaying 18 items

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