ggKbase home page

S28_scaffold_1111_curated

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_1111_curated_1
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(2..1093)
DNA (1092bp) protein (364aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G5L6_9GAMM
methyl-accepting chemotaxis sensory transducer
Tax=GWC1_Treponema_61_84_curated
S28_scaffold_1111_curated_2
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(1394..2080)
DNA (687bp) protein (229aa)
Putative uncharacterized protein id=4095158 bin=GWB1_Spirochaetes_59_5 species=unknown genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
HAD hydrolase, IA, variant 1 family protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_1111_curated_3
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(2077..2610)
DNA (534bp) protein (178aa)
Uncharacterized protein id=4016776 bin=GWB1_Spirochaetes_59_5 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_1111_curated_4
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(2734..3456)
DNA (723bp) protein (241aa)
Transcriptional regulator id=2164805 bin=GWE2_Bacteroidetes_32_14 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
LuxR family transcriptional regulator
Tax=RBG_16_Spirochaete_67_19_curated
S28_scaffold_1111_curated_5
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

3625..4062
DNA (438bp) protein (146aa)
id=2164807 bin=GWE2_Bacteroidetes_32_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
Tax=RBG_16_Spirochaete_67_19_curated
S28_scaffold_1111_curated_6
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

4245..5069
DNA (825bp) protein (275aa)
estradiol 17-beta-dehydrogenase 12 (EC:1.1.1.62)
Putative short-chain dehydrogenase n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VDS3_9BACT
Tax=RBG_16_Spirochaete_67_19_curated
S28_scaffold_1111_curated_7
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5069..5974
DNA (906bp) protein (302aa)
4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TN61_ALKMQ
4Fe-4S ferredoxin
4Fe-4S ferredoxin, iron-sulfur binding domain protein {ECO:0000313|EMBL:ABR47629.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
S28_scaffold_1111_curated_8
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

5977..6588
DNA (612bp) protein (204aa)
Methyltransferase type 11 id=5799922 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
type 11 methyltransferase
Tax=RBG_16_Spirochaetes_49_21_curated
S28_scaffold_1111_curated_9
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(6661..6894)
DNA (234bp) protein (78aa)
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
Displaying 9 items

View Taxonomy