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S28_scaffold_469_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_469_curated_1
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(2..103)
DNA (102bp) protein (34aa)
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_469_curated_2
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(114..1289)
DNA (1176bp) protein (392aa)
Putative branched-chain amino acid ABC transporter permease protein id=4084881 bin=GWB1_Spirochaetes_59_5 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
putative branched-chain amino acid ABC transporter permease rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_469_curated_3
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(1358..2545)
DNA (1188bp) protein (396aa)
Putative branched-chain amino acid ABC transporter substrate binding protein id=4084879 bin=GWB1_Spirochaetes_59_5 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
putative branched-chain amino acid ABC transporter substrate binding protein rbh
Tax=GWB1_Spirochaetes_59_5_curated
S28_scaffold_469_curated_4
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

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comp(3096..5033)
DNA (1938bp) protein (646aa)
AMP-forming long-chain acyl-CoA synthetase n=1 Tax=Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) RepID=H9UFA1_SPIAZ rbh
AMP-forming long-chain acyl-CoA synthetase rbh
Tax=RBG_13_Spirochaetes_68_11_curated
S28_scaffold_469_curated_5
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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5194..6159
DNA (966bp) protein (322aa)
Lysophospholipase (EC:3.1.1.5)
Lysophospholipase n=1 Tax=Bacillus alcalophilus ATCC 27647 RepID=J8TQ78_BACAO
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_469_curated_6
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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6261..6695
DNA (435bp) protein (145aa)
fucose isomerase n=1 Tax=Paenibacillus elgii RepID=UPI000248C326
RbsD or FucU transport
RbsD or FucU transport {ECO:0000313|EMBL:AIF51354.1}; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus sp. UFO1.;"
S28_scaffold_469_curated_7
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(6762..7739)
DNA (978bp) protein (326aa)
Xylose isomerase id=4457039 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes rbh
xylose isomerase domain-containing protein rbh
Tax=RBG_16_Spirochaete_67_19_curated
S28_scaffold_469_curated_8
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(7755..8786)
DNA (1032bp) protein (344aa)
Transcriptional regulator, LacI family n=1 Tax=Denitrovibrio acetiphilus (strain DSM 12809 / N2460) RepID=D4H242_DENA2
LacI family transcriptional regulator
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_469_curated_9
Treponema phagedenis, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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9044..10096
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Treponema phagedenis F0421 RepID=E7NWQ3_TREPH rbh
Uncharacterized protein {ECO:0000313|EMBL:CEM61799.1}; TaxID=162 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema phagedenis.;"
sugar ABC transporter periplasmic protein rbh
S28_scaffold_469_curated_10
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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10205..11698
DNA (1494bp) protein (498aa)
Monosaccharide-transporting ATPase (EC:3.6.3.17)
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:AIF50196.1}; EC=3.6.3.17 {ECO:0000313|EMBL:AIF50196.1};; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus sp. UFO1.;"
ABC-type sugar transport system, ATPase component n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QYD4_SPHPG rbh
S28_scaffold_469_curated_11
Treponema phagedenis, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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11712..12530
DNA (819bp) protein (273aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Treponema phagedenis F0421 RepID=E7NWQ5_TREPH rbh
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EFW37007.1}; TaxID=754027 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema phagedenis F0421.;"
monosaccharide ABC transporter membrane protein, CUT2 family
Displaying 11 items

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