ggKbase home page

S28_scaffold_1348_curated

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_1348_curated_1
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(2..202)
DNA (201bp) protein (67aa)
Type IV pilus assembly PilZ id=3748381 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_1348_curated_2
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

1459..1965
DNA (507bp) protein (169aa)
Glucose-6-phosphate isomerase id=2892985 bin=GWF1_Spirochaetes_60_12 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
glucose-6-phosphate isomerase
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_1348_curated_3
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

1962..3068
DNA (1107bp) protein (369aa)
undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase id=2892988 bin=GWF1_Spirochaetes_60_12 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes rbh
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_1348_curated_4
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

3065..3532
DNA (468bp) protein (156aa)
CvpA family protein id=3173965 bin=GWB1_Spirochaetales_60_80 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
cvpA; CvpA family protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_1348_curated_5
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

3536..4804
DNA (1269bp) protein (423aa)
DNA polymerase III subunit gamma/tau id=2892992 bin=GWF1_Spirochaetes_60_12 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes rbh
DNA polymerase III subunit gamma/tau
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_1348_curated_6
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

4801..6024
DNA (1224bp) protein (408aa)
PAS/PAC sensor signal transduction histidine kinase id=2892994 bin=GWF1_Spirochaetes_60_12 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes rbh
PAS/PAC sensor signal transduction histidine kinase rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_1348_curated_7
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

6021..7376
DNA (1356bp) protein (452aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EZ61_SPICH rbh
Fis family two component sigma-54 specific transcriptional regulator rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_1348_curated_8
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(7383..7958)
DNA (576bp) protein (192aa)
Heat shock protein DnaJ domain protein id=2893016 bin=GWF1_Spirochaetes_60_12 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
heat shock protein DnaJ domain-containing protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_1348_curated_9
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(7955..8473)
DNA (519bp) protein (173aa)
Molecular chaperone id=2893018 bin=GWF1_Spirochaetes_60_12 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
heat shock protein 70
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
Displaying 9 items

View Taxonomy