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S28_scaffold_228_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_228_curated_1
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

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comp(724..2031)
DNA (1308bp) protein (436aa)
TRAP dicarboxylate transporter, DctM subunit id=3495072 bin=GWA1_Treponema_62_8 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes rbh
TRAP dicarboxylate transporter subunit DctM rbh
Tax=RBG_13_Spirochaetes_68_11_curated
S28_scaffold_228_curated_2
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

Not on your lists

comp(2028..2522)
DNA (495bp) protein (165aa)
Tripartite ATP-independent periplasmic transporter DctQ component id=3495071 bin=GWA1_Treponema_62_8 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
putative transporter
Tax=RBG_13_Spirochaetes_68_11_curated
S28_scaffold_228_curated_3
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(2645..3673)
DNA (1029bp) protein (343aa)
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family id=3495070 bin=GWA1_Treponema_62_8 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes rbh
TRAP dicarboxylate family transporter subunit DctP rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_228_curated_4
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(3830..4579)
DNA (750bp) protein (250aa)
Transcriptional regulator, IclR family n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ACM7_CARHZ
IclR family transcriptional regulator
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_228_curated_5
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

4722..5258
DNA (537bp) protein (179aa)
hypothetical protein
Uncharacterized protein id=4374980 bin=GWC2_Spirochaete_52_13 species=Rhizopus delemar genus=Rhizopus taxon_order=Mucorales taxon_class=unknown phylum=unknown tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_228_curated_6
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

5262..6455
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00036A0356 rbh
putative oxidoreductase rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_228_curated_7
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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6527..11053
DNA (4527bp) protein (1509aa)
Putative CoA-substrate-specific enzyme activase id=3830601 bin=GWB1_Spirochaetes_59_5 species=Anaerobaculum hydrogeniformans genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
activator of 2-hydroxyglutaryl-CoA dehydratase rbh
Tax=GWB1_Spirochaetes_59_5_curated
S28_scaffold_228_curated_8
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(11075..11605)
DNA (531bp) protein (177aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KYT7_PARAV
hypothetical protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_228_curated_9
Treponema azotonutricium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(11678..12355)
DNA (678bp) protein (226aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5Y7Z4_TREAZ
HAD superfamily hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:AEF83038.1}; TaxID=545695 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9).;"
S28_scaffold_228_curated_10
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

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comp(12387..13670)
DNA (1284bp) protein (428aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EXV2_SPICH rbh
alcohol dehydrogenase zinc-binding domain-containing protein rbh
Tax=GWC1_Treponema_61_84_curated
S28_scaffold_228_curated_11
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(13730..15256)
DNA (1527bp) protein (509aa)
Carbohydrate kinase, FGGY n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EXV1_SPICH rbh
carbohydrate kinase rbh
Carbohydrate kinase, FGGY {ECO:0000313|EMBL:AEJ20115.1}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
S28_scaffold_228_curated_12
Treponema maltophilum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(15267..16418)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Treponema maltophilum ATCC 51939 RepID=S3KJK0_TREMA rbh
Uncharacterized protein {ECO:0000313|EMBL:EPF32402.1}; TaxID=1125699 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema maltophilum ATCC 51939.;"
short-chain dehydrogenase/reductase SDR rbh
S28_scaffold_228_curated_13
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(16422..17834)
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EXU9_SPICH rbh
hypothetical protein rbh
Tax=GWC1_Treponema_61_84_curated
S28_scaffold_228_curated_14
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(17834..20311)
DNA (2478bp) protein (826aa)
Pyruvate dehydrogenase (acetyl-transferring) (EC:1.2.4.1) rbh
dehydrogenase n=1 Tax=Treponema primitia RepID=UPI0002554F4D rbh
Tax=GWC1_Treponema_61_84_curated
S28_scaffold_228_curated_15
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(20405..21820)
DNA (1416bp) protein (472aa)
lpdA; dihydrolipoyl dehydrogenase (EC:1.8.1.4) rbh
Dihydrolipoyl dehydrogenase id=3545483 bin=GWB1_Spirochaetes_59_5 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
Tax=GWB1_Spirochaetes_59_5_curated
S28_scaffold_228_curated_16
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(21831..23276)
DNA (1446bp) protein (482aa)
acetoin cleaving system dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12) rbh
dihydrolipoyllysine acetyltransferase n=1 Tax=Treponema primitia RepID=UPI0002554F4F rbh
Tax=GWC1_Treponema_61_84_curated
S28_scaffold_228_curated_17
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(23302..24057)
DNA (756bp) protein (252aa)
Transcriptional regulator, DeoR family n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EXU5_SPICH
DeoR family transcriptional regulator
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:AEJ20109.1}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
Displaying 17 items

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