ggKbase home page

S28_scaffold_2409_curated

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_2409_curated_1
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(217..1095)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Paenibacillus terrae (strain HPL-003) RepID=G7VY72_PAETH
hypothetical protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_2409_curated_2
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(1322..2179)
DNA (858bp) protein (286aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133) rbh
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:AEJ18692.1}; EC=1.1.1.133 {ECO:0000313|EMBL:AEJ18692.1};; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
dTDP-4-dehydrorhamnose reductase n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F039_SPICH rbh
S28_scaffold_2409_curated_3
Bacteroides sp. CAG:661, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2443..3456)
DNA (1014bp) protein (338aa)
GHMP kinase protein n=1 Tax=Bacteroides sp. CAG:661 RepID=R5SQX1_9BACE rbh
GHMP kinase protein {ECO:0000313|EMBL:CCZ49121.1}; TaxID=1262746 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:661.;"
hypothetical protein
S28_scaffold_2409_curated_4
Psychromonas ingrahamii, Psychromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3594..4172
DNA (579bp) protein (193aa)
Transposase, IS4 family n=1 Tax=Psychromonas ingrahamii (strain 37) RepID=A1SUP8_PSYIN
transposase IS4 family protein
Transposase, IS4 family {ECO:0000313|EMBL:ABM03213.1}; TaxID=357804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Psychromonadaceae; Psychromonas.;" source="Psychromonas ingrahamii (strain 37).;"
Displaying 4 items

View Taxonomy