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S28_scaffold_381_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_381_curated_1
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(1..399)
DNA (399bp) protein (133aa)
Signal transduction histidine kinase id=3707110 bin=GWB1_CP_36_13 species=Leptospira biflexa genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
signal transduction histidine kinase
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_381_curated_2
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(564..953)
DNA (390bp) protein (130aa)
Response regulator receiver protein id=2925948 bin=GWF1_Spirochaetes_60_12 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
response regulator receiver protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_381_curated_3
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(1024..2184)
DNA (1161bp) protein (387aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZV66_MELRP
PAS/PAC sensor signal transduction histidine kinase
Tax=BJP_IG2102_Ignavibacteriales_35_8
S28_scaffold_381_curated_trna_1
unknown

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2328..2413
DNA (86bp)
transferRNA Leu
S28_scaffold_381_curated_4
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

2790..3221
DNA (432bp) protein (144aa)
2-polyprenylphenol hydroxylase-like oxidoreductase id=3724828 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
oxidoreductase FAD/NAD(P)-binding domain-containing protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_381_curated_5
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

3224..4222
DNA (999bp) protein (333aa)
Dihydroorotate dehydrogenase id=3724829 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
dihydroorotate dehydrogenase rbh
Tax=GWB1_Spirochaetes_59_5_curated
S28_scaffold_381_curated_6
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

4383..4934
DNA (552bp) protein (184aa)
GPR1/FUN34/yaaH family protein id=3724827 bin=GWB1_Spirochaetes_59_5 species=Desulfovibrio desulfuricans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
GPR1/FUN34/yaaH family protein
Tax=GWB1_Spirochaetes_59_5_curated
S28_scaffold_381_curated_7
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

5238..6212
DNA (975bp) protein (325aa)
Phosphate binding protein id=3724902 bin=GWB1_Spirochaetes_59_5 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
phosphate binding protein rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_381_curated_8
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

6339..7295
DNA (957bp) protein (319aa)
Phosphate ABC transporter, inner membrane subunit PstC id=4015176 bin=GWB1_Spirochaetales_60_80 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes rbh
Phosphate transport system permease protein PstC
Tax=GWB1_Spirochaetes_60_80_curated
S28_scaffold_381_curated_9
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

7292..8545
DNA (1254bp) protein (418aa)
Phosphate ABC transporter, inner membrane subunit PstA id=3724909 bin=GWB1_Spirochaetes_59_5 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
Phosphate transport system permease protein PstA
Tax=GWB1_Spirochaetes_59_5_curated
S28_scaffold_381_curated_10
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

8545..9360
DNA (816bp) protein (272aa)
Phosphate ABC transporter ATP-binding protein id=4015172 bin=GWB1_Spirochaetales_60_80 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes rbh
pstB; phosphate ABC transporter ATP-binding protein rbh
Tax=GWB1_Spirochaetes_60_80_curated
S28_scaffold_381_curated_11
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

9378..10037
DNA (660bp) protein (220aa)
Phosphate uptake regulator, PhoU id=3724915 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
phosphate uptake regulator PhoU
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_381_curated_12
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

10072..10773
DNA (702bp) protein (234aa)
Two component transcriptional regulator, winged helix family id=3724916 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
winged helix family two component transcriptional regulator
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_381_curated_13
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

10770..12671
DNA (1902bp) protein (634aa)
PAS:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A-like id=4015166 bin=GWB1_Spirochaetales_60_80 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes rbh
hypothetical protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_381_curated_14
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(12578..13351)
DNA (774bp) protein (258aa)
id=2883953 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_381_curated_15
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

13469..14887
DNA (1419bp) protein (473aa)
Putative uncharacterized protein id=2883947 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
hypothetical protein rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
Displaying 16 items

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