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S28_scaffold_255_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_255_curated_1
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

2..358
DNA (357bp) protein (119aa)
Short-chain dehydrogenase/reductase SDR id=3648976 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
short-chain dehydrogenase/reductase SDR
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_255_curated_2
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

387..1577
DNA (1191bp) protein (397aa)
Radical SAM domain protein id=3648975 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
radical SAM protein rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_255_curated_3
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

1657..2487
DNA (831bp) protein (277aa)
Zinc transporter ZupT n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6BZJ6_DESAD rbh
zinc transporter ZupT rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_255_curated_4
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

2637..3503
DNA (867bp) protein (289aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EYI4_SPICH rbh
phospholipid/glycerol acyltransferase rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_255_curated_5
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(3388..4089)
DNA (702bp) protein (234aa)
id=3648996 bin=GWB1_Spirochaetes_59_5 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_255_curated_6
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

4245..5855
DNA (1611bp) protein (537aa)
Heavy metal-associated domain protein id=1287673 bin=GWE1_Spirochaete_60_18 species=Clostridium sp. MSTE9 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes rbh
heavy metal transport/detoxification protein rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_255_curated_7
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

5977..8445
DNA (2469bp) protein (823aa)
Heavy-metal transporting P-type ATPase id=1287674 bin=GWE1_Spirochaete_60_18 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes rbh
heavy metal translocating P-type ATPase rbh
Tax=GWB1_Spirochaetes_60_80_curated
S28_scaffold_255_curated_8
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

8442..8756
DNA (315bp) protein (105aa)
Putative uncharacterized protein id=4015065 bin=GWB1_Spirochaetales_60_80 species=Bacillus megaterium genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
hypothetical protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_255_curated_9
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

8806..9486
DNA (681bp) protein (227aa)
Putative lipoprotein id=3013940 bin=GWF1_Spirochaetes_60_12 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_255_curated_10
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

9492..10256
DNA (765bp) protein (255aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YKR0_TREPZ
winged helix family two component transcriptional regulator
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_255_curated_11
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

10253..11719
DNA (1467bp) protein (489aa)
Histidine kinase,HAMP domain-containing protein,histidine kinase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LXB1_CLOCD
histidine kinase,HAMP domain-containing protein,histidine kinase
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_255_curated_12
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

11738..12883
DNA (1146bp) protein (382aa)
Diguanylate cyclase id=1282512 bin=GWE1_Spirochaete_60_18 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes rbh
hypothetical protein
Tax=GWB1_Spirochaetes_60_80_curated
S28_scaffold_255_curated_13
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

12967..14568
DNA (1602bp) protein (534aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI0003751E6F rbh
selenium-dependent molybdenum hydroxylase system protein, YqeB family rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_255_curated_14
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(14598..15581)
DNA (984bp) protein (328aa)
Putative DHH superfamily protein, subfamily 1 id=2566524 bin=GWB1_Spirochaetes_59_5 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
putative DHH superfamily protein rbh
Tax=GWB1_Spirochaetes_59_5_curated
S28_scaffold_255_curated_15
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

15733..16758
DNA (1026bp) protein (342aa)
diguanylate cyclase n=1 Tax=Desulfovibrio longus RepID=UPI0003B6B275
diguanylate cyclase
Tax=GWB2_Clostridiales_37_7_curated
S28_scaffold_255_curated_16
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

16886..18112
DNA (1227bp) protein (409aa)
Tyrosyl-tRNA synthetase (EC:6.1.1.1) rbh
Tyrosine--tRNA ligase id=2566527 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
Tax=GWB1_Spirochaetes_59_5_curated
S28_scaffold_255_curated_17
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

18117..18482
DNA (366bp) protein (122aa)
Tax=GWB1_Spirochaetes_59_5_curated
S28_scaffold_255_curated_18
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(18499..20232)
DNA (1734bp) protein (578aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI000363620A rbh
signal transduction histidine kinase rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_255_curated_19
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(20236..21594)
DNA (1359bp) protein (453aa)
Formate C-acetyltransferase id=3940011 bin=GWB1_Spirochaetes_59_5 species=Thermanaerovibrio acidaminovorans genus=Thermanaerovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
formate C-acetyltransferase rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
Displaying 19 items

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