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S28_scaffold_360_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_360_curated_1
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(215..1144)
DNA (930bp) protein (310aa)
Ribonuclease Z id=1308009 bin=GWE1_Spirochaete_60_18 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes rbh
ribonuclease Z rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_360_curated_2
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

1225..2310
DNA (1086bp) protein (362aa)
adenosine deaminase (EC:3.5.4.4) rbh
Adenosine deaminase n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1RAG5_SPISS rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_360_curated_3
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

2371..4170
DNA (1800bp) protein (600aa)
DEAD/DEAH box helicase domain protein id=2640090 bin=GWF1_Spirochaetes_60_12 species=Desulfitobacterium metallireducens genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes rbh
DEAD/DEAH box helicase domain-containing protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_360_curated_4
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(4172..5797)
DNA (1626bp) protein (542aa)
Methyl-accepting chemotaxis protein id=3621880 bin=GWB1_Spirochaetales_60_80 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes rbh
methyl-accepting chemotaxis protein
Tax=GWB1_Spirochaetes_60_80_curated
S28_scaffold_360_curated_5
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(5794..7584)
DNA (1791bp) protein (597aa)
Adenine-specific DNA methylase id=3953058 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
adenine-specific DNA methylase rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_360_curated_6
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(7574..7933)
DNA (360bp) protein (120aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase id=3953057 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
6-pyruvoyl-tetrahydropterin synthase
Tax=GWB1_Spirochaetes_59_5_curated
S28_scaffold_360_curated_7
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

8031..9581
DNA (1551bp) protein (517aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13) rbh
UDP-N-acetylmuramyl-tripeptide synthetase id=3953056 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
Tax=GWB1_Spirochaetes_59_5_curated
S28_scaffold_360_curated_8
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

9578..10672
DNA (1095bp) protein (365aa)
D-alanine--D-alanine ligase (EC:6.3.2.4) rbh
D-alanine--D-alanine ligase id=3953028 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
Tax=GWB1_Spirochaetes_59_5_curated
S28_scaffold_360_curated_9
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

10881..12080
DNA (1200bp) protein (400aa)
ornithine aminotransferase (EC:2.6.1.13) rbh
Ornithine aminotransferase id=2987177 bin=GWF1_Spirochaetes_60_12 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_360_curated_10
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(12171..13418)
DNA (1248bp) protein (416aa)
Integral membrane sensor signal transduction histidine kinase id=3953025 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
integral membrane sensor signal transduction histidine kinase
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_360_curated_11
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

13523..15370
DNA (1848bp) protein (616aa)
Tetratricopeptide TPR_2 repeat-containing protein id=2640103 bin=GWF1_Spirochaetes_60_12 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes rbh
TPR rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
Displaying 11 items

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