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S28_RifOxy_Spirochaetales_55_9_curated

FUEL_CELL_S28_RIFOXYC1_FULL_Spirochaetes_54_7_curated_54_1
In projects: FUEL_CELL_S28  |  fuel_cell_curated

Consensus taxonomy: RIFOXYC1_FULL_Spirochaetes_54_7_curated  →  Spirochaetales  →  Spirochaetia  →  Spirochatetes  →  Bacteria

Displaying items 51-100 of 430 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
S28_scaffold_5819_curated
Species: GWB1_Spirochaetes_59_5_curated (66.67%)
3 2283 bp 59.88 1.00 97.11
S28_scaffold_1443_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (100%)
6 5894 bp 55.48 1.00 89.07
S28_scaffold_8570_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (100%)
1 1587 bp 55.01 1.00 95.84
S28_scaffold_228_curated
Order: Spirochaetales (64.71%)
17 24116 bp 58.52 1.00 93.39
S28_scaffold_1824_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (66.67%)
3 5576 bp 54.20 1.00 97.70
S28_scaffold_188_curated
Order: Spirochaetales (55.56%)
27 33422 bp 48.09 1.00 94.70
S28_scaffold_10600_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (100%)
3 1420 bp 49.51 1.00 79.86
S28_scaffold_1476_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (50%)
6 5768 bp 56.22 1.00 86.88
S28_scaffold_391_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (50%)
14 14552 bp 52.74 1.00 91.82
S28_scaffold_2675_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (80%)
5 3873 bp 52.96 1.00 94.35
S28_scaffold_6996_curated
Species: GWB1_Spirochaetes_59_5_curated (66.67%)
3 2009 bp 57.44 1.00 83.33
S28_scaffold_1479_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (60%)
5 5812 bp 53.94 1.00 80.52
S28_scaffold_13158_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1176 bp 50.85 1.00 78.32
S28_scaffold_3318_curated 3 3418 bp 53.45 1.00 72.06
S28_scaffold_1132_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (75%)
8 6906 bp 51.19 1.00 93.87
S28_scaffold_12108_curated
Species: GWB1_Spirochaetes_59_5_curated (100%)
1 1265 bp 57.63 1.00 99.84
S28_scaffold_14370_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (50%)
2 1069 bp 54.44 1.00 88.96
S28_scaffold_923_curated
Order: Spirochaetales (50%)
8 7955 bp 53.93 1.00 88.85
S28_scaffold_680_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (100%)
8 9625 bp 51.90 1.00 97.25
S28_scaffold_350_curated
Domain: Bacteria (93.33%)
15 15912 bp 55.27 1.00 93.95
S28_scaffold_685_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (50%)
4 9688 bp 59.41 1.00 91.20
S28_scaffold_455_curated
Order: Spirochaetales (71.43%)
7 12783 bp 54.72 1.00 96.03
S28_scaffold_6359_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (66.67%)
3 2138 bp 60.29 1.00 98.92
S28_scaffold_358_curated
Order: Spirochaetales (76.92%)
13 15574 bp 53.05 1.00 95.33
S28_scaffold_14682_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (100%)
1 1067 bp 55.11 1.00 99.81
S28_scaffold_451_curated
Order: Spirochaetales (61.54%)
13 12901 bp 54.58 1.00 92.13
S28_scaffold_9687_curated
Species: GWB1_Spirochaetes_59_5_curated (100%)
1 1298 bp 59.32 1.00 99.85
S28_scaffold_534_curated
Order: Spirochaetales (55.56%)
9 11335 bp 53.52 1.00 80.38
S28_scaffold_323_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (58.82%)
17 17280 bp 55.75 1.00 97.14
S28_scaffold_530_curated
Order: Spirochaetales (57.14%)
14 11381 bp 54.22 1.00 88.31
S28_scaffold_320_curated
Order: Spirochaetales (50%)
16 17161 bp 56.63 1.00 84.07
S28_scaffold_8141_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (50%)
2 1776 bp 53.27 1.00 66.89
S28_scaffold_1529_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (57.14%)
7 5674 bp 55.16 1.00 94.96
S28_scaffold_12402_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (100%)
1 1217 bp 54.07 1.00 95.40
S28_scaffold_483_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (60%)
10 12071 bp 51.96 1.00 85.42
S28_scaffold_8621_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (50%)
2 1414 bp 54.31 1.00 85.22
S28_scaffold_482_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (91.67%)
12 13445 bp 54.50 1.00 94.34
S28_scaffold_3558_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (100%)
3 3186 bp 52.45 1.00 92.84
S28_scaffold_480_curated
Order: Spirochaetales (60%)
15 12295 bp 54.63 1.00 82.10
S28_scaffold_9867_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (100%)
2 1482 bp 61.67 1.00 93.72
S28_scaffold_665_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (60%)
10 9856 bp 53.54 1.00 94.39
S28_scaffold_6625_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (66.67%)
3 2050 bp 51.76 1.00 93.66
S28_scaffold_485_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (55.56%)
9 12191 bp 53.47 1.00 94.79
S28_scaffold_1073_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (62.5%)
8 7228 bp 49.74 1.00 66.87
S28_scaffold_1523_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (80%)
10 9933 bp 51.70 1.00 78.71
S28_scaffold_5025_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (50%)
4 2577 bp 49.09 1.00 94.99
S28_scaffold_2055_curated
Order: Spirochaetales (60%)
5 4529 bp 59.42 1.00 94.99
S28_scaffold_762_curated
Order: Spirochaetales (60%)
10 9054 bp 56.09 1.00 86.48
S28_scaffold_3196_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (66.67%)
3 3536 bp 55.63 1.00 95.11
S28_scaffold_1274_curated
Species: GWB1_Spirochaetes_59_5_curated (60%)
5 6415 bp 51.27 1.00 94.70
Displaying items 51-100 of 430 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.