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S4_scaffold_1695_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S4_scaffold_1695_curated_1
Mesorhizobium sp. L2C054A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..179
DNA (177bp) protein (59aa)
UPI0003CF1837 related cluster n=1 Tax=unknown RepID=UPI0003CF1837
Hrp-dependent type III effector protein {ECO:0000313|EMBL:ESZ48359.1}; TaxID=1287100 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C054A000.;"
type III effector Hrp-dependent outer domain-containing protein
S4_scaffold_1695_curated_2
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(724..1824)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IH51_AZOC5
Uncharacterized protein {ECO:0000313|EMBL:CDX42078.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
S4_scaffold_1695_curated_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1821..2825)
DNA (1005bp) protein (335aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262) rbh
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7XWJ9_9RHIZ rbh
S4_scaffold_1695_curated_4
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2866..3615)
DNA (750bp) protein (250aa)
Putative Granaticin polyketide synthase ketoacyl reductase 2 {ECO:0000313|EMBL:CDX14960.1}; EC=1.3.1.- {ECO:0000313|EMBL:CDX14960.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Pseudomonas fluorescens F113 RepID=G8Q8B3_PSEFL rbh
3-oxoacyl-ACP reductase rbh
S4_scaffold_1695_curated_5
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3629..4567)
DNA (939bp) protein (313aa)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:CDX42086.1}; EC=1.1.1.35 {ECO:0000313|EMBL:CDX42086.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
putative 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157) rbh
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RSH0_9PROT rbh
S4_scaffold_1695_curated_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4567..5442)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Loktanella cinnabarina LL-001 RepID=U2Z8J9_9RHOB rbh
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:CDX14964.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
putative beta-lactamase domain protein
S4_scaffold_1695_curated_7
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5414..6031)
DNA (618bp) protein (206aa)
Uncharacterized protein {ECO:0000313|EMBL:CDX42092.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
S4_scaffold_1695_curated_8
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6024..7067)
DNA (1044bp) protein (348aa)
Transcriptional regulator, LacI family n=1 Tax=Loktanella cinnabarina LL-001 RepID=U2Z7G2_9RHOB rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:CDX14969.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
LacI family transcriptional regulator
S4_scaffold_1695_curated_9
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7091..8380)
DNA (1290bp) protein (430aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
histidinol dehydrogenase (EC:1.1.1.23) rbh
Histidinol dehydrogenase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A138_STAND rbh
S4_scaffold_1695_curated_10
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8446..9666)
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00035E791F rbh
Monosaccharide ABC transporter substrate-binding protein, CUT2 family {ECO:0000313|EMBL:CDX50148.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
sugar ABC transporter periplasmic ligand binding protein rbh
S4_scaffold_1695_curated_11
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9768..10796)
DNA (1029bp) protein (343aa)
Ribose ABC transport system, permease protein RbsC n=1 Tax=Loktanella cinnabarina LL-001 RepID=U2Z8J4_9RHOB rbh
Monosaccharide ABC transporter membrane protein, CUT2 family {ECO:0000313|EMBL:CDX14976.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
branched-chain amino acid transport system / permease component family protein
S4_scaffold_1695_curated_12
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10793..11050)
DNA (258bp) protein (86aa)
Ribose ABC transport system, permease protein RbsC n=1 Tax=Loktanella cinnabarina LL-001 RepID=U2YPP9_9RHOB
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporter {ECO:0000313|EMBL:CDX14978.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
branched-chain amino acid transport system / permease component family protein
Displaying 12 items

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