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S4_scaffold_1871_curated

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S4_scaffold_1871_curated_1
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..997
DNA (996bp) protein (332aa)
Monooxygenase FAD-binding n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6B8W2_RHILS rbh
monooxygenase FAD-binding rbh
Monooxygenase FAD-binding {ECO:0000313|EMBL:ACS60350.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
S4_scaffold_1871_curated_2
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1006..1890
DNA (885bp) protein (295aa)
catechol 1,2-dioxygenase (EC:1.13.11.1)
Protocatechuate 3,4-dioxygenase beta subunit n=1 Tax=Rhizobium sp. CF122 RepID=J2JAQ8_9RHIZ rbh
Protocatechuate 3,4-dioxygenase beta subunit {ECO:0000313|EMBL:EJL58113.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
S4_scaffold_1871_curated_3
unknown

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2043..2417
DNA (375bp) protein (125aa)

This feature has no annotations

S4_scaffold_1871_curated_4
unknown

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3144..3416
DNA (273bp) protein (91aa)

This feature has no annotations

S4_scaffold_1871_curated_5
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3359..3502)
DNA (144bp) protein (48aa)
Succinate-semialdehyde dehydrogenase I, NADP-dependent {ECO:0000313|EMBL:CDX33367.1}; EC=1.2.1.16 {ECO:0000313|EMBL:CDX33367.1};; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
UPI0003CED5F9 related cluster n=1 Tax=unknown RepID=UPI0003CED5F9
succinate-semialdehyde dehdyrogenase
S4_scaffold_1871_curated_6
Mesorhizobium sp. LNJC399B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4866..6095)
DNA (1230bp) protein (410aa)
Alcohol dehydrogenase n=1 Tax=Mesorhizobium sp. LNJC380A00 RepID=V7GNE0_9RHIZ rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:ESY06392.1}; TaxID=1287277 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC399B00.;"
iron-containing alcohol dehydrogenase rbh
S4_scaffold_1871_curated_7
Mesorhizobium sp. LNJC386A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6270..6968
DNA (699bp) protein (233aa)
GntR family transcriptional regulator n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7FXI8_9RHIZ rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:ESY37375.1}; TaxID=1287270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC386A00.;"
transcriptional regulator rbh
S4_scaffold_1871_curated_8
Mesorhizobium sp. L2C085B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7132..7725
DNA (594bp) protein (198aa)
UPI0003CE59FB related cluster n=1 Tax=unknown RepID=UPI0003CE59FB rbh
Glutamine amidotransferase {ECO:0000313|EMBL:ESZ14794.1}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C085B000.;"
hypothetical protein rbh
S4_scaffold_1871_curated_9
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7772..8668)
DNA (897bp) protein (299aa)
GntR family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FP21_9RHIZ rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:ESX80884.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
GntR family transcriptional regulator
S4_scaffold_1871_curated_10
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8838..9890
DNA (1053bp) protein (351aa)
Ribose ABC transporter permease n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FLG2_9RHIZ rbh
Ribose ABC transporter permease {ECO:0000313|EMBL:ESX80883.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
ribose ABC transporter permease protein
S4_scaffold_1871_curated_11
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9887..10672
DNA (786bp) protein (262aa)
sugar ABC transporter ATP-binding protein (EC:3.6.3.17)
Sugar ABC transporter ATP-binding protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FPN9_9RHIZ rbh
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESX80882.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
S4_scaffold_1871_curated_12
unknown

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comp(10779..11231)
DNA (453bp) protein (151aa)

This feature has no annotations

S4_scaffold_1871_curated_13
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11565..11681
DNA (117bp) protein (39aa)
ABC transporter substrate-binding protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FNS9_9RHIZ
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESX80881.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
S4_scaffold_1871_curated_14
unknown

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comp(12063..12356)
DNA (294bp) protein (98aa)

This feature has no annotations

S4_scaffold_1871_curated_15
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12576..12764
DNA (189bp) protein (63aa)
UPI0003CF01E2 related cluster n=1 Tax=unknown RepID=UPI0003CF01E2
Dehydrogenase {ECO:0000313|EMBL:ESW89836.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
alcohol dehydrogenase GroES domain-containing protein
S4_scaffold_1871_curated_16
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13242..13673
DNA (432bp) protein (144aa)
UPI0003CE1AFB related cluster n=1 Tax=unknown RepID=UPI0003CE1AFB
Uncharacterized protein {ECO:0000313|EMBL:ESY67396.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
hypothetical protein
S4_scaffold_1871_curated_17
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14198..14983)
DNA (786bp) protein (262aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TN70_MESCW rbh
short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADV11628.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
S4_scaffold_1871_curated_18
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14997..15737)
DNA (741bp) protein (247aa)
Transcriptional regulator n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F3D1_9RHIZ rbh
Transcriptional regulator {ECO:0000313|EMBL:CCV11832.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
GntR family transcriptional regulator rbh
S4_scaffold_1871_curated_19
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15923..17092
DNA (1170bp) protein (390aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
mannonate dehydratase (EC:4.2.1.8) rbh
UPI0003D0558D related cluster n=1 Tax=unknown RepID=UPI0003D0558D rbh
Displaying 19 items

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