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S4_scaffold_623_curated

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S4_scaffold_623_curated_1
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..1076)
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=UPI00036C2C81 rbh
Diguanylate cyclase {ECO:0000313|EMBL:CDQ45430.1}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
diguanylate cyclase rbh
S4_scaffold_623_curated_2
unknown

Not on your lists

comp(1231..1446)
DNA (216bp) protein (72aa)

This feature has no annotations

S4_scaffold_623_curated_3
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1472..2644
DNA (1173bp) protein (391aa)
Uncharacterized protein n=2 Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=I7GGP7_MYCS2 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFP43049.1}; TaxID=246196 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155).;"
S4_scaffold_623_curated_4
Rhodococcus aetherivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2679..3668)
DNA (990bp) protein (330aa)
extradiol ring-cleavage dioxygenase n=1 Tax=Mycobacterium sp. 141 RepID=UPI0003745D77 rbh
Extradiol ring-cleavage dioxygenase {ECO:0000313|EMBL:AKE92161.1}; TaxID=191292 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus aetherivorans.;"
extradiol ring-cleavage dioxygenase
S4_scaffold_623_curated_5
Rhodococcus sp. BCP1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3665..4525)
DNA (861bp) protein (287aa)
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase n=1 Tax=Rhodococcus sp. EsD8 RepID=N1LZS1_9NOCA rbh
2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase {ECO:0000313|EMBL:KDE11313.1}; TaxID=931223 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. BCP1.;"
2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase rbh
S4_scaffold_623_curated_6
Mycobacterium marinum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4522..6117)
DNA (1596bp) protein (532aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 155 RepID=UPI000378A711 rbh
FAD-dependent oxidoreductase rbh
FAD-dependent oxidoreductase {ECO:0000313|EMBL:ACC39954.1}; TaxID=216594 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium marinum (strain ATCC BAA-535 / M).;"
S4_scaffold_623_curated_7
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6210..6833
DNA (624bp) protein (208aa)
TetR family transcriptional regulator n=3 Tax=Mycobacterium avium RepID=V7J356_MYCAV
TetR family transcriptional regulator {ECO:0000313|EMBL:ETB41271.1}; TaxID=1381559 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium avium subsp. hominissuis 10-5606.;"
TetR family transcriptional regulator
S4_scaffold_623_curated_8
Mycobacterium abscessus, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6830..7603
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 155 RepID=UPI00037A3AD0 rbh
Fumarylacetoacetate (FAA) hydrolase family protein {ECO:0000313|EMBL:EUA70915.1}; TaxID=1299321 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium abscessus.;" source="Mycobacterium abscessus subsp. bolletii 1513.;"
2-keto-4-pentenoate hydratase
S4_scaffold_623_curated_9
Gordonia sputi, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7611..8567
DNA (957bp) protein (319aa)
Acetaldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01657, ECO:0000256|SAAS:SAAS00042164}; EC=1.2.1.10 {ECO:0000256|HAMAP-Rule:MF_01657, ECO:0000256|SAAS:SAAS00042125};; Acetaldehyde dehydrogenase [acetylating] {ECO:0000256|HAMAP-Rule:MF_01657}; TaxID=1089453 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sputi NBRC 100414.;"
acetaldehyde dehydrogenase (EC:1.2.1.10) rbh
Acetaldehyde dehydrogenase n=1 Tax=Gordonia sputi NBRC 100414 RepID=H5TWR0_9ACTO rbh
S4_scaffold_623_curated_10
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8564..9595
DNA (1032bp) protein (344aa)
4-hydroxy-2-oxovalerate aldolase {ECO:0000256|HAMAP-Rule:MF_01656, ECO:0000256|SAAS:SAAS00035546}; Short=HOA {ECO:0000256|HAMAP-Rule:MF_01656};; EC=4.1.3.39 {ECO:0000256|HAMAP-Rule:MF_01656, ECO:0000256|SAAS:SAAS00035546};; 4-hydroxy-2-keto-pentanoic acid aldolase {ECO:0000256|HAMAP-Rule:MF_01656}; 4-hydroxy-2-oxopentanoate aldolase {ECO:0000256|HAMAP-Rule:MF_01656}; TaxID=931627 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae JS60.;"
4-hyroxy-2-oxovalerate aldolase n=1 Tax=Mycobacterium sp. 141 RepID=UPI0003685EE1 rbh
4-hydroxy-2-ketovalerate aldolase rbh
S4_scaffold_623_curated_11
Mycobacterium colombiense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9634..10275
DNA (642bp) protein (214aa)
HxlR family transcriptional regulator n=1 Tax=Mycobacterium colombiense CECT 3035 RepID=J7UD13_9MYCO rbh
HxlR family transcriptional regulator {ECO:0000313|EMBL:EJO91281.1}; TaxID=1041522 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium colombiense CECT 3035.;"
putative transcriptional regulator, HxlR family
S4_scaffold_623_curated_12
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10285..12573)
DNA (2289bp) protein (763aa)
ATP-dependent DNA ligase {ECO:0000313|EMBL:AHC27179.1}; EC=6.5.1.1 {ECO:0000313|EMBL:AHC27179.1};; TaxID=700508 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum VKM Ac-1815D.;"
ATP-dependent DNA ligase (EC:6.5.1.1)
ATP-dependent DNA ligase n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XID4_MYCNE rbh
S4_scaffold_623_curated_13
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12605..13504
DNA (900bp) protein (300aa)
DNA repair protein n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XFH7_MYCNE rbh
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
DNA repair protein
S4_scaffold_623_curated_14
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13776..14567
DNA (792bp) protein (264aa)
Short-chain dehydrogenase n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XHP0_MYCNE rbh
short-chain dehydrogenase
Short-chain dehydrogenase {ECO:0000313|EMBL:AHC27181.1}; TaxID=700508 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum VKM Ac-1815D.;"
S4_scaffold_623_curated_15
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14577..15683
DNA (1107bp) protein (369aa)
diacylglycerol kinase n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=UPI0002F26DE4 rbh
Dihydrodipicolinate reductase {ECO:0000313|EMBL:CDQ45419.1}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
diacylglycerol kinase
S4_scaffold_623_curated_16
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15786..15995
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RNU3_MYCRN
Uncharacterized protein {ECO:0000313|EMBL:CDO07110.1}; Flags: Precursor;; TaxID=258533 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.;"
hypothetical protein
S4_scaffold_623_curated_17
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16086..17315
DNA (1230bp) protein (410aa)
Divalent metal cation transporter MntH n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0J5H7_MYCSM rbh
natural resistance-associated macrophage protein metal ion transporter NRAMP rbh
Divalent metal cation transporter MntH {ECO:0000256|HAMAP-Rule:MF_00221}; Flags: Precursor;; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
S4_scaffold_623_curated_18
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17370..18386
DNA (1017bp) protein (339aa)
Phage-related replication protein n=1 Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RNU1_MYCRN rbh
Phage-related replication protein {ECO:0000313|EMBL:CDO07112.1}; TaxID=258533 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.;"
phage-related replication protein rbh
S4_scaffold_623_curated_19
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18439..19770
DNA (1332bp) protein (444aa)
Amine oxidase n=1 Tax=Mycobacterium tusciae JS617 RepID=H1K9D7_9MYCO rbh
amine oxidase rbh
Flavin containing amine oxidoreductase family protein {ECO:0000313|EMBL:EUA15888.1}; TaxID=1299326 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii 662.;"
S4_scaffold_623_curated_20
Mycobacterium liflandii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19764..20525
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Mycobacterium marinum str. Europe RepID=S7S9C6_MYCMR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGC60834.1}; TaxID=459424 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium liflandii (strain 128FXT).;"
S4_scaffold_623_curated_21
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20522..21799
DNA (1278bp) protein (426aa)
Methyltransferase, cyclopropane fatty acid synthase n=1 Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RNT8_MYCRN rbh
methyltransferase, cyclopropane fatty acid synthase rbh
Methyltransferase, cyclopropane fatty acid synthase {ECO:0000313|EMBL:AEV73789.1}; TaxID=710685 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae (strain NBB3).;"
S4_scaffold_623_curated_22
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21816..22406
DNA (591bp) protein (197aa)
RNA polymerase sigma factor SigK n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=UPI0002FA7ADB rbh
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:CDQ45414.1}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
RNA polymerase sigma factor SigK
S4_scaffold_623_curated_23
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22403..23122
DNA (720bp) protein (240aa)
Anti-sigma K factor n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XH94_MYCNE rbh
anti-sigma K factor
Anti-sigma K factor {ECO:0000313|EMBL:AHC27188.1}; TaxID=700508 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum VKM Ac-1815D.;"
S4_scaffold_623_curated_24
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23141..23938
DNA (798bp) protein (266aa)
Luciferase n=2 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XIE2_MYCNE rbh
luciferase
Luciferase {ECO:0000313|EMBL:AHC27189.1}; TaxID=700508 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum VKM Ac-1815D.;"
S4_scaffold_623_curated_25
Mycobacterium farcinogenes, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24077..26182
DNA (2106bp) protein (702aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=1802 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium farcinogenes.;"
catalase (EC:1.11.1.6) rbh
Catalase n=2 Tax=Mycobacterium gilvum RepID=A4TA40_MYCGI rbh
S4_scaffold_623_curated_26
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26195..27388
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI000371DA0D rbh
Transmembrane protein {ECO:0000313|EMBL:CDO09077.1}; TaxID=258533 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.;"
hypothetical protein rbh
S4_scaffold_623_curated_trna_1
unknown

Not on your lists

27416..27488
DNA (73bp)
transferRNA Arg
S4_scaffold_623_curated_27
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27492..27944)
DNA (453bp) protein (151aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=700508 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum VKM Ac-1815D.;"
Alkylhydroperoxidase n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5X7E4_MYCNE
alkylhydroperoxidase
S4_scaffold_623_curated_28
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28085..29356
DNA (1272bp) protein (424aa)
Response regulator receiver:Protein phosphatase 2C-like protein n=2 Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=I7FMA1_MYCS2 rbh
Response regulator receiver:Protein phosphatase 2C-like protein rbh
Response regulator receiver:Protein phosphatase 2C-like protein {ECO:0000313|EMBL:AFP42405.1}; TaxID=246196 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155).;"
S4_scaffold_623_curated_29
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29359..30927
DNA (1569bp) protein (523aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=700508 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum VKM Ac-1815D.;"
Histidine kinase n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XGR6_MYCNE rbh
histidine kinase
Displaying items 1-30 of 38 in total

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