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S4_scaffold_456_curated

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S4_scaffold_456_curated_1
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(131..1048)
DNA (918bp) protein (306aa)
nucleoside triphosphate pyrophosphohydrolase (EC:3.6.1.19)
Nucleoside triphosphate pyrophosphohydrolase n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XGF1_MYCNE rbh
Nucleoside triphosphate pyrophosphohydrolase {ECO:0000313|EMBL:CDO06945.1}; TaxID=258533 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.;"
S4_scaffold_456_curated_2
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1045..4716)
DNA (3672bp) protein (1224aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=700508 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum VKM Ac-1815D.;"
Transcription-repair coupling factor n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XGZ6_MYCNE rbh
transcription-repair coupling factor
S4_scaffold_456_curated_3
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4773..5363)
DNA (591bp) protein (197aa)
TetR family transcriptional regulator n=2 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XF81_MYCNE rbh
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AHC27075.1}; TaxID=700508 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum VKM Ac-1815D.;"
S4_scaffold_456_curated_trna_1
unknown

Not on your lists

5450..5521
DNA (72bp)
transferRNA Gln
S4_scaffold_456_curated_4
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5616..7061
DNA (1446bp) protein (482aa)
glmU; N-acetylglucosamine-1-phosphate uridyltransferase (EC:2.3.1.157)
hypothetical protein n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=UPI000382B435 rbh
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
S4_scaffold_456_curated_5
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7149..8129
DNA (981bp) protein (327aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XGF6_MYCNE rbh
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:CDQ45541.1}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
S4_scaffold_456_curated_6
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8140..8481
DNA (342bp) protein (114aa)
Arsenate reductase n=1 Tax=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) RepID=A1TEF7_MYCVP
Arsenate reductase {ECO:0000313|EMBL:CDO06952.1}; Flags: Precursor;; TaxID=258533 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.;"
arsenate reductase
S4_scaffold_456_curated_7
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8496..9149
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XI61_MYCNE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHC27079.1}; TaxID=700508 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum VKM Ac-1815D.;"
S4_scaffold_456_curated_8
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9164..10030
DNA (867bp) protein (289aa)
Short-chain dehydrogenase n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XF86_MYCNE rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CDQ45538.1}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
short-chain dehydrogenase
S4_scaffold_456_curated_9
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


10154..10813
DNA (660bp) protein (220aa)
50S ribosomal protein L25 n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XHF1_MYCNE rbh
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
50S ribosomal protein L25
S4_scaffold_456_curated_10
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10835..11410
DNA (576bp) protein (192aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=700508 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum VKM Ac-1815D.;"
Peptidyl-tRNA hydrolase n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XGG0_MYCNE rbh
peptidyl-tRNA hydrolase
S4_scaffold_456_curated_11
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11421..12083)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XH04_MYCNE rbh
Uncharacterized protein {ECO:0000313|EMBL:CDQ45535.1}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
hypothetical protein
S4_scaffold_456_curated_12
Mycobacterium vanbaalenii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12116..12352)
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) RepID=A1TEG6_MYCVP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM15566.1}; Flags: Precursor;; TaxID=350058 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1).;"
S4_scaffold_456_curated_13
Mycobacterium vanbaalenii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12394..12834)
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) RepID=A1TEG7_MYCVP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM15567.1}; Flags: Precursor;; TaxID=350058 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1).;"
S4_scaffold_456_curated_14
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12939..14576)
DNA (1638bp) protein (546aa)
Long-chain fatty acid--CoA ligase n=2 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XI63_MYCNE rbh
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CDQ45534.1}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
long-chain fatty acid--CoA ligase
S4_scaffold_456_curated_15
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14848..15774)
DNA (927bp) protein (309aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XF91_MYCNE rbh
S4_scaffold_456_curated_16
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(16021..16956)
DNA (936bp) protein (312aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
dimethyladenosine transferase (EC:2.1.1.-) rbh
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0J261_MYCSM rbh
S4_scaffold_456_curated_17
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16953..18080)
DNA (1128bp) protein (376aa)
Resuscitation-promoting factor rpfB n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XHF6_MYCNE rbh
resuscitation-promoting factor rpfB
Resuscitation-promoting factor rpfB {ECO:0000313|EMBL:AHC27086.1}; TaxID=700508 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum VKM Ac-1815D.;"
S4_scaffold_456_curated_18
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18202..19032)
DNA (831bp) protein (277aa)
DNAase n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XGG4_MYCNE rbh
DNAase
DNAase {ECO:0000313|EMBL:AHC27087.1}; TaxID=700508 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum VKM Ac-1815D.;"
S4_scaffold_456_curated_19
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


19059..20594
DNA (1536bp) protein (512aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
methionine--tRNA ligase (EC:6.1.1.10)
methionyl-tRNA synthetase n=1 Tax=Mycobacterium sp. 141 RepID=UPI00035CF9DB rbh
S4_scaffold_456_curated_20
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20681..21823
DNA (1143bp) protein (381aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XHF9_MYCNE rbh
NADH dehydrogenase, FAD-containing subunit {ECO:0000313|EMBL:CDQ45525.1}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
S4_scaffold_456_curated_21
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21820..22704
DNA (885bp) protein (295aa)
RNA polymerase sigma24 factor n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XGH0_MYCNE rbh
RNA polymerase sigma24 factor
RNA polymerase sigma24 factor {ECO:0000313|EMBL:AHC27092.1}; TaxID=700508 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum VKM Ac-1815D.;"
S4_scaffold_456_curated_22
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22724..23971
DNA (1248bp) protein (416aa)
aminodeoxychorismate synthase (EC:2.6.1.85)
Aminodeoxychorismate synthase n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XH14_MYCNE rbh
Aminodeoxychorismate synthase, component I {ECO:0000313|EMBL:CDQ45523.1}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
S4_scaffold_456_curated_23
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23911..24360)
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Mycobacterium tusciae JS617 RepID=H1K4J5_9MYCO
Uncharacterized protein {ECO:0000313|EMBL:CDQ45522.1}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
hypothetical protein
S4_scaffold_456_curated_24
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24377..25213)
DNA (837bp) protein (279aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=258533 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.;"
16S rRNA methyltransferase n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XF99_MYCNE rbh
16S rRNA methyltransferase
S4_scaffold_456_curated_25
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25238..26776
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XHG3_MYCNE rbh
Dolichyl-phosphate-mannose--protein O-mannosyl transferase {ECO:0000313|EMBL:CDQ45520.1}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
hypothetical protein
S4_scaffold_456_curated_26
Mycobacterium setense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26944..27810
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0VDF7_MYCFO rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO17559.1}; TaxID=431269 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium setense.;"
hypothetical protein
S4_scaffold_456_curated_27
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27867..28310
DNA (444bp) protein (148aa)
MerR-family transcriptional regulator n=3 Tax=Mycobacterium smegmatis RepID=I7G7P5_MYCS2
MerR family transcriptional regulator
MerR family transcriptional regulator {ECO:0000313|EMBL:CKI31601.1}; TaxID=1772 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis.;"
S4_scaffold_456_curated_28
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28341..28979
DNA (639bp) protein (213aa)
Alkylated DNA repair protein n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XHG8_MYCNE rbh
alkylated DNA repair protein
Alkylated DNA repair protein {ECO:0000313|EMBL:AHC27101.1}; TaxID=700508 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum VKM Ac-1815D.;"
S4_scaffold_456_curated_29
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28976..29641)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=UPI0003793E6F rbh
Uncharacterized protein {ECO:0000313|EMBL:CDQ45514.1}; Flags: Precursor;; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
hypothetical protein
Displaying items 1-30 of 61 in total

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