ggKbase home page

S4_scaffold_853_curated

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S4_scaffold_853_curated_1
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..469
DNA (468bp) protein (156aa)
Uncharacterized protein n=2 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XHF7_MYCNE
HNH endonuclease {ECO:0000313|EMBL:CDQ45333.1}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
hypothetical protein
S4_scaffold_853_curated_2
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(505..1410)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XGW3_MYCNE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHC27262.1}; TaxID=700508 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum VKM Ac-1815D.;"
S4_scaffold_853_curated_3
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1489..2628)
DNA (1140bp) protein (380aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=258533 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.;"
Phosphoserine aminotransferase n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XHV5_MYCNE rbh
phosphoserine aminotransferase
S4_scaffold_853_curated_4
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2625..3572)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=UPI0002EE1C9F rbh
Membrane protease subunit, stomatin/prohibitin {ECO:0000313|EMBL:CDQ45336.1}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
membrane protease subunit, stomatin/prohibitin
S4_scaffold_853_curated_5
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3813..4844
DNA (1032bp) protein (344aa)
Membrane protein n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XIJ2_MYCNE rbh
membrane protein
Membrane protein {ECO:0000313|EMBL:AHC27259.1}; TaxID=700508 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum VKM Ac-1815D.;"
S4_scaffold_853_curated_6
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4864..6507
DNA (1644bp) protein (548aa)
Ferredoxin n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XHF2_MYCNE rbh
ferredoxin
Ferredoxin {ECO:0000313|EMBL:AHC27258.1}; TaxID=700508 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum VKM Ac-1815D.;"
S4_scaffold_853_curated_7
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6582..9050
DNA (2469bp) protein (823aa)
Glycoside hydrolase n=2 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XGV8_MYCNE rbh
glycoside hydrolase
Glycoside hydrolase family protein {ECO:0000313|EMBL:CDQ45339.1}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
S4_scaffold_853_curated_8
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9031..9483)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 155 RepID=UPI00036D5FB6
hypothetical protein
Glyoxalase/bleomycin resistance protein/dioxygenase superfamily {ECO:0000313|EMBL:ELQ86723.1}; TaxID=1214915 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis MKD8.;"
S4_scaffold_853_curated_9
Mycobacterium setense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9575..10183)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 141 RepID=UPI00035E80BB
Mycothiol maleylpyruvate isomerase N-terminal domain protein {ECO:0000313|EMBL:KHO20994.1}; TaxID=431269 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium setense.;"
mycothiol maleylpyruvate isomerase N-terminal domain protein
S4_scaffold_853_curated_10
Mycobacterium vulneris, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10180..11307)
DNA (1128bp) protein (376aa)
citrate synthase 2 (EC:2.3.3.1) rbh
Citrate synthase n=1 Tax=Mycobacterium sp. (strain JLS) RepID=A3Q629_MYCSJ rbh
Citrate synthase 2 {ECO:0000313|EMBL:CDO31958.1}; TaxID=547163 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium vulneris.;"
S4_scaffold_853_curated_11
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11362..12021
DNA (660bp) protein (220aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
Pyridoxamine 5'-phosphate oxidase n=2 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XHE8_MYCNE rbh
pyridoxamine 5'-phosphate oxidase
S4_scaffold_853_curated_12
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12059..12751
DNA (693bp) protein (231aa)
TetR family transcriptional regulator n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XGV5_MYCNE rbh
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AHC27252.1}; TaxID=700508 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum VKM Ac-1815D.;"
S4_scaffold_853_curated_13
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12744..13439
DNA (696bp) protein (232aa)
TetR family transcriptional regulator n=2 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XHU7_MYCNE rbh
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AHC27251.1}; TaxID=700508 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum VKM Ac-1815D.;"
S4_scaffold_853_curated_14
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13512..14813
DNA (1302bp) protein (434aa)
gltA; type II citrate synthase (EC:2.3.3.1)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
Type II citrate synthase n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XFP7_MYCNE rbh
S4_scaffold_853_curated_15
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14889..16331
DNA (1443bp) protein (481aa)
Major facilitator transporter n=2 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XII6_MYCNE rbh
major facilitator transporter
Major facilitator transporter {ECO:0000313|EMBL:AHC27249.1}; TaxID=700508 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum VKM Ac-1815D.;"
S4_scaffold_853_curated_16
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16324..16734
DNA (411bp) protein (137aa)
MarR family transcriptional regulator n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XHE6_MYCNE
MarR family transcriptional regulator {ECO:0000313|EMBL:CDQ45348.1}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
MarR family transcriptional regulator
S4_scaffold_853_curated_17
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16745..18280)
DNA (1536bp) protein (512aa)
FAD dependent oxidoreductase n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XGV0_MYCNE rbh
Phytoene dehydrogenase {ECO:0000313|EMBL:CDQ45349.1}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
FAD dependent oxidoreductase
S4_scaffold_853_curated_18
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18334..18696
DNA (363bp) protein (121aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=258533 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XHU2_MYCNE
peptidyl-prolyl cis-trans isomerase
S4_scaffold_853_curated_19
Mycobacterium farcinogenes, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18707..19669
DNA (963bp) protein (321aa)
Outer membrane protein OmpA n=1 Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0VN20_MYCFO
Outer membrane protein OmpA {ECO:0000313|EMBL:CDP88502.1}; TaxID=1802 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium farcinogenes.;"
ompA; Outer membrane protein a OmpA
S4_scaffold_853_curated_20
unknown

Not on your lists

19691..19795
DNA (105bp) protein (35aa)

This feature has no annotations

S4_scaffold_853_curated_21
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19869..21227)
DNA (1359bp) protein (453aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
Histidine kinase n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XII3_MYCNE rbh
histidine kinase
S4_scaffold_853_curated_22
Mycobacterium sp. KMS, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21242..21367)
DNA (126bp) protein (42aa)
Two component transcriptional regulator, winged helix family n=2 Tax=Mycobacterium RepID=A1ULL8_MYCSK
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABL93726.1}; TaxID=189918 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain KMS).;"
Displaying 22 items

View Taxonomy