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S4_scaffold_551_curated

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Displaying items 1-30 of 41 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S4_scaffold_551_curated_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..375)
DNA (375bp) protein (125aa)
histidinol dehydrogenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F12605
ABC transporter related protein {ECO:0000313|EMBL:KFC62166.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter-like protein
S4_scaffold_551_curated_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(365..1186)
DNA (822bp) protein (274aa)
ABC transporter related n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UQG5_METS4 rbh
ABC transporter, high-affinity branched-chain amino acid transport ATP-binding protein LivG {ECO:0000313|EMBL:KFC62165.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter-like protein rbh
S4_scaffold_551_curated_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1297..2508)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P0V6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36227.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ABC-type branched-chain amino acid transport systems, periplasmic component rbh
S4_scaffold_551_curated_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2541..4154)
DNA (1614bp) protein (538aa)
gamma-glutamyltransferase (EC:2.3.2.2) rbh
Gamma-glutamyltransferase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PD29_9BRAD rbh
Gamma-glutamyltransferase {ECO:0000313|EMBL:EKS36228.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
S4_scaffold_551_curated_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4236..5249
DNA (1014bp) protein (338aa)
Transcriptional regulator, LysR family n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q137N6_RHOPS rbh
LysR, substrate-binding rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABE39703.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
S4_scaffold_551_curated_6
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5330..5902)
DNA (573bp) protein (191aa)
Transcriptional regulator, TetR family protein n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LIK7_BURGS
TetR family transcriptional regulator {ECO:0000313|EMBL:KDP86351.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
Transcriptional regulator, TetR family
S4_scaffold_551_curated_7
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5941..6489)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036D7E11
Uncharacterized protein {ECO:0000313|EMBL:KDP75477.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
NUDIX hydrolase
S4_scaffold_551_curated_8
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6631..7164)
DNA (534bp) protein (178aa)
Phosphotransferase system mannitol/fructose-specific IIA domain-containing protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TGX6_TISMK
ptsN; phosphotransferase system mannitol/fructose-specific IIA domain-containing protein
Phosphotransferase system mannitol/fructose-specific IIA domain-containing protein {ECO:0000313|EMBL:AFK52014.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
S4_scaffold_551_curated_9
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7271..7681)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000376D1FE
Transcription elongation factor {ECO:0000313|EMBL:EZQ15489.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
nucleoside diphosphate kinase regulator
S4_scaffold_551_curated_10
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7816..8400
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6XCU1_METSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT50366.1}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
S4_scaffold_551_curated_11

Not on your lists

comp(8684..9799)
DNA (1116bp) protein (372aa)
Transposase IS66 (Fragment) n=1 Tax=Rhizobium sp. Pop5 RepID=K0VCS2_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN70007.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
S4_scaffold_551_curated_12
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9768..10292)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WS16_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ37227.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
Uncharacterized protein y4hP
S4_scaffold_551_curated_13
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10337..10555)
DNA (219bp) protein (73aa)
IS66 Orf2 family protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IP84_XANP2
IS66 Orf2 family protein
IS66 Orf2 family protein {ECO:0000313|EMBL:ABS69830.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S4_scaffold_551_curated_14
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10552..10947)
DNA (396bp) protein (132aa)
Transposase IS3/IS911 family protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IP85_XANP2
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ABS69831.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S4_scaffold_551_curated_15
unknown

Not on your lists

comp(10985..11233)
DNA (249bp) protein (83aa)

This feature has no annotations

S4_scaffold_551_curated_16
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11273..11491
DNA (219bp) protein (73aa)
transposase n=1 Tax=Methylobacterium sp. 77 RepID=UPI0003627A71
transposase
Transposase and inactivated derivatives-like protein {ECO:0000313|EMBL:ACK81047.1}; TaxID=440085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain CM4 / NCIMB 13688); (Methylobacterium chloromethanicum).;"
S4_scaffold_551_curated_17
bacterium YEK0313, Bacteria

Not on your lists

comp(11920..13269)
DNA (1350bp) protein (450aa)
hypothetical protein n=1 Tax=Pseudoclavibacter faecalis RepID=UPI00037948E4 rbh
Proline/betaine transporter {ECO:0000313|EMBL:CEJ10197.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
major facilitator superfamily transporter rbh
S4_scaffold_551_curated_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(13326..14177)
DNA (852bp) protein (284aa)
nitrilase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B36EAA
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
S4_scaffold_551_curated_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14294..15217
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00037FE44E
Uncharacterized protein {ECO:0000313|EMBL:EKS36229.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
LysR, substrate-binding
S4_scaffold_551_curated_20
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15189..15554)
DNA (366bp) protein (122aa)
Transposase and inactivated derivatives-like protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J3T8_POLGS
transposase and inactivated derivatives-like protein
Transposase and inactivated derivatives-like protein {ECO:0000313|EMBL:ADZ68920.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
S4_scaffold_551_curated_21
unknown

Not on your lists

15603..15857
DNA (255bp) protein (85aa)

This feature has no annotations

S4_scaffold_551_curated_22
Novosphingobium sp. TVG9-VII, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15854..16879
DNA (1026bp) protein (342aa)
Transposase n=1 Tax=Novosphingobium sp. TVG9-VII RepID=G4WYQ0_9SPHN rbh
Transposase {ECO:0000313|EMBL:AEP14461.1}; TaxID=1028165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. TVG9-VII.;"
transposase IS116/IS110/IS902 family protein rbh
S4_scaffold_551_curated_23
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16916..17482)
DNA (567bp) protein (189aa)
Transposase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BV02_9RHIZ
Transposase {ECO:0000313|EMBL:EIM73404.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
transposase
S4_scaffold_551_curated_24
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18187..21066)
DNA (2880bp) protein (960aa)
Conjugative relaxase domain protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M9U8_METRJ rbh
conjugative relaxase domain-containing protein rbh
Conjugative relaxase domain protein {ECO:0000313|EMBL:ACB28273.1}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
S4_scaffold_551_curated_25
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21063..21341)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5B1S6_METEA
Uncharacterized protein {ECO:0000313|EMBL:GAN50996.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
hypothetical protein
S4_scaffold_551_curated_26
unknown

Not on your lists

21391..21567
DNA (177bp) protein (59aa)

This feature has no annotations

S4_scaffold_551_curated_27
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21594..22067
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CJT0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIZ84322.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
hypothetical protein
S4_scaffold_551_curated_28
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22074..22793
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00036558F9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL06710.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
S4_scaffold_551_curated_29
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22804..23376
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CDX3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:GAN50999.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
hypothetical protein
S4_scaffold_551_curated_30
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23503..25155)
DNA (1653bp) protein (551aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5B1T0_METEA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACS39714.1}; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;"
Displaying items 1-30 of 41 in total

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