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S5_scaffold_758_curated

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_758_curated_1
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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333..626
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LQA8_DESBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU89134.1}; TaxID=525897 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiaceae; Desulfomicrobium.;" source="Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378); (Desulfovibrio baculatus).;"
S5_scaffold_758_curated_2
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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632..2179
DNA (1548bp) protein (516aa)
SSS sodium solute transporter superfamily n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LQA9_DESBD rbh
SSS sodium solute transporter superfamily protein rbh
SSS sodium solute transporter superfamily {ECO:0000313|EMBL:ACU89135.1}; TaxID=525897 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiaceae; Desulfomicrobium.;" source="Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378); (Desulfovibrio baculatus).;"
S5_scaffold_758_curated_3
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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2176..3624
DNA (1449bp) protein (483aa)
Cyclic nucleotide-binding protein n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LQB0_DESBD rbh
cyclic nucleotide-binding protein rbh
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:ACU89136.1}; TaxID=525897 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiaceae; Desulfomicrobium.;" source="Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378); (Desulfovibrio baculatus).;"
S5_scaffold_758_curated_4
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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3621..5345
DNA (1725bp) protein (575aa)
Putative signal transduction protein with CBS domains n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DPI7_DESVM
signal transduction protein with CBS domains
Putative signal transduction protein with CBS domains {ECO:0000313|EMBL:ACL07274.1}; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;"
S5_scaffold_758_curated_5
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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5317..6009
DNA (693bp) protein (231aa)
Exonuclease, RNase T and DNA polymerase III n=1 Tax=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) RepID=A1VGE3_DESVV
exonuclease
Tax=GWC2_Nitrospirae_57_13_curated
S5_scaffold_758_curated_6
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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6118..8100
DNA (1983bp) protein (661aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
Acetyl-coenzyme A synthetase n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q4U6_9DELT rbh
acsA; acetyl-coenzyme A synthetase rbh
S5_scaffold_758_curated_7
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8355..10211
DNA (1857bp) protein (619aa)
Methyl-accepting chemotaxis sensory transducer with Cache sensor n=2 Tax=Desulfovibrio vulgaris RepID=E3ILF1_DESVR rbh
methyl-accepting chemotaxis protein rbh
Methyl-accepting chemotaxis sensory transducer with Cache sensor {ECO:0000313|EMBL:ADP87531.1}; TaxID=573059 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain RCH1).;"
S5_scaffold_758_curated_8
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10228..12885
DNA (2658bp) protein (886aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
Sensor histidine kinase n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XQ38_DESMR rbh
sensor histidine kinase rbh
S5_scaffold_758_curated_9
unknown

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comp(13140..14417)
DNA (1278bp) protein (426aa)

This feature has no annotations

S5_scaffold_758_curated_10
Desulfovibrio salexigens, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14614..15924)
DNA (1311bp) protein (437aa)
sulfate adenylyltransferase (EC:2.7.7.4) rbh
Sulfate adenylyltransferase {ECO:0000313|EMBL:ACS78295.1}; EC=2.7.7.4 {ECO:0000313|EMBL:ACS78295.1};; TaxID=526222 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 /; VKM B-1763).;"
Sulfate adenylyltransferase n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6BVT1_DESAD rbh
S5_scaffold_758_curated_11
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16157..16531
DNA (375bp) protein (125aa)
Anti-sigma factor antagonist n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q608Q9_METCA
anti-anti-sigma factor family protein
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
S5_scaffold_758_curated_12
Desulfonatronospira thiodismutans, Desulfonatronospira, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(16539..17147)
DNA (609bp) protein (203aa)
Nitroreductase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SPD5_9DELT
Nitroreductase {ECO:0000313|EMBL:EFI34611.1}; TaxID=555779 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfonatronospira.;" source="Desulfonatronospira thiodismutans ASO3-1.;"
putative nitroreductase
S5_scaffold_758_curated_13
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17217..17702)
DNA (486bp) protein (162aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1262666 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus PCS.;"
phosphodiesterase n=1 Tax=Desulfovibrio longus RepID=UPI0003B4EEF9
phosphodiesterase, MJ0936 family
S5_scaffold_758_curated_14
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17708..18349)
DNA (642bp) protein (214aa)
Metal dependent phosphohydrolase n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7UAP3_9DELT
Pyridoxal phosphatase {ECO:0000313|EMBL:KHK01630.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
hypothetical protein
Displaying 14 items

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