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S5_scaffold_711_curated

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_711_curated_1
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(65..241)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7TB82_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPR34412.1}; TaxID=1121439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alkalitolerans DSM 16529.;"
hypothetical protein
S5_scaffold_711_curated_2
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(260..586)
DNA (327bp) protein (109aa)
Transcriptional regulator, ArsR family n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LXF4_DESBD
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ACU90025.1}; TaxID=525897 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiaceae; Desulfomicrobium.;" source="Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378); (Desulfovibrio baculatus).;"
S5_scaffold_711_curated_3
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1047..1727
DNA (681bp) protein (227aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QEA9_9DELT
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:EHJ46003.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
Filamentation induced by cAMP protein Fic
S5_scaffold_711_curated_4
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1724..2269
DNA (546bp) protein (182aa)
Site-specific recombinase n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XM83_DESMR
site-specific recombinase
Site-specific recombinase {ECO:0000313|EMBL:BAH77211.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
S5_scaffold_711_curated_5
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(2413..3888)
DNA (1476bp) protein (492aa)
Radical SAM domain protein id=4185292 bin=GWF2_Bacteroidetes_40_14 species=Treponema brennaborense genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes rbh
radical SAM protein
Tax=GWF2_Bacteroidetes_40_14_curated
S5_scaffold_711_curated_6
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4492..5037)
DNA (546bp) protein (182aa)
DNA mismatch endonuclease Vsr n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0VEB8_RHILV
DNA mismatch endonuclease Vsr {ECO:0000313|EMBL:EJC71108.1}; Flags: Precursor;; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
DNA mismatch endonuclease vsr
S5_scaffold_711_curated_7
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5034..6710)
DNA (1677bp) protein (559aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0BM33_RHILV rbh
Uncharacterized protein {ECO:0000313|EMBL:CDH86667.1}; TaxID=1401243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti RU11/001.;"
adenylosuccinate lyase
S5_scaffold_711_curated_8
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6720..8375)
DNA (1656bp) protein (552aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0VCT0_RHILV rbh
ATPase {ECO:0000313|EMBL:CDH86668.1}; TaxID=1401243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti RU11/001.;"
hypothetical protein
S5_scaffold_711_curated_9
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8344..9843)
DNA (1500bp) protein (500aa)
DNA (Cytosine-5-)-methyltransferase {ECO:0000313|EMBL:CDH86669.1}; EC=2.1.1.37 {ECO:0000313|EMBL:CDH86669.1};; TaxID=1401243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti RU11/001.;"
DNA-methyltransferase Dcm n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0BX26_RHILV rbh
site-specific DNA methylase
S5_scaffold_711_curated_10
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10198..10833
DNA (636bp) protein (212aa)
ATPase involved in chromosome partitioning n=1 Tax=Desulfovibrio sp. U5L RepID=I2PX32_9DELT
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:EIG52088.1}; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
parA; plasmid partitioning-family protein
S5_scaffold_711_curated_11
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10849..11094
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. U5L RepID=I2PX33_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EIG52089.1}; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
S5_scaffold_711_curated_12
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11109..12440)
DNA (1332bp) protein (444aa)
HipA domain protein n=2 Tax=Desulfovibrio vulgaris RepID=E3ITH6_DESVR rbh
hypothetical protein rbh
Conserved domain protein {ECO:0000313|EMBL:AAS94448.1}; TaxID=882 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB; 8303).;"
S5_scaffold_711_curated_13
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12418..12786)
DNA (369bp) protein (123aa)
Transcriptional regulator, XRE family n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LTR9_DESBD
XRE family transcriptional regulator {ECO:0000313|EMBL:KHA62715.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
XRE family transcriptional regulator
S5_scaffold_711_curated_14
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13168..14055)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NMG2_DESTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK81223.1}; TaxID=651182 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacula.;" source="Desulfobacula toluolica (strain DSM 7467 / Tol2).;"
S5_scaffold_711_curated_15
unknown

Not on your lists

14334..14654
DNA (321bp) protein (107aa)

This feature has no annotations

S5_scaffold_711_curated_16
unknown

Not on your lists

comp(14761..15054)
DNA (294bp) protein (98aa)

This feature has no annotations

S5_scaffold_711_curated_17
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15069..15749)
DNA (681bp) protein (227aa)
Phage tail collar family protein n=1 Tax=Desulfovibrio sp. U5L RepID=I2PX37_9DELT
Phage tail collar family protein {ECO:0000313|EMBL:EIG52093.1}; Flags: Precursor;; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
S5_scaffold_711_curated_18
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15746..17734)
DNA (1989bp) protein (663aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
DNA topoisomerase 1 n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QB84_9DELT rbh
topoisomerase I rbh
S5_scaffold_711_curated_19
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17746..18351)
DNA (606bp) protein (202aa)
Lytic transglycosylase catalytic n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QB83_9DELT
Lytic transglycosylase catalytic {ECO:0000313|EMBL:KHK00373.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
lytic transglycosylase
S5_scaffold_711_curated_20
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18348..19862)
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QB82_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:EHJ48824.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
hypothetical protein
Displaying 20 items

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