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S5_scaffold_35_curated

Search features with annotation key words

Displaying items 1-30 of 261 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_35_curated_1
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

333..1046
DNA (714bp) protein (238aa)
Nucleotidyl transferase n=1 Tax=uncultured bacterium RepID=K2CKZ6_9BACT
glucose-1-phosphate cytidylyltransferase
Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
S5_scaffold_35_curated_2
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

1049..2041
DNA (993bp) protein (331aa)
NAD-dependent epimerase/dehydratase id=32456 bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER rbh
nucleoside-diphosphate-sugar epimerase
Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
S5_scaffold_35_curated_3
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

2038..2916
DNA (879bp) protein (293aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B097_FRADG
Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
S5_scaffold_35_curated_4
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3100..4197
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P4F5_9BRAD
ubiE; ubiquinone/menaquinone biosynthesis methyltransferase
Tax=GWF2_Bacteroidetes_33_38_curated
S5_scaffold_35_curated_5
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4210..5142)
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=unclassified Cloacimonetes RepID=UPI00036F5439
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ADQ79274.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
S5_scaffold_35_curated_6
unknown

Not on your lists

5440..5868
DNA (429bp) protein (143aa)

This feature has no annotations

S5_scaffold_35_curated_7
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7119..8648)
DNA (1530bp) protein (510aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3K2_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79296.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
S5_scaffold_35_curated_8
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8668..10128)
DNA (1461bp) protein (487aa)
Radical SAM domain protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JXW0_DESFR rbh
Radical SAM domain protein {ECO:0000313|EMBL:EFL50883.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
Radical SAM domain protein
S5_scaffold_35_curated_9
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10136..10894)
DNA (759bp) protein (253aa)
Hexapaptide repeat-containing transferase n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JXV9_DESFR rbh
Hexapaptide repeat-containing transferase {ECO:0000313|EMBL:EFL50882.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
hexapaptide repeat-containing transferase
S5_scaffold_35_curated_10
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10896..12962)
DNA (2067bp) protein (689aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
Glycosyl transferase family 2 n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JXR9_DESFR rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:EFL50842.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
S5_scaffold_35_curated_11
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12947..13522)
DNA (576bp) protein (192aa)
N-acetylglucosamine-1-phosphate uridyltransferase n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JXS0_DESFR
N-acetylglucosamine-1-phosphate uridyltransferase {ECO:0000313|EMBL:EFL50843.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
acetyl transferase/isomerase
S5_scaffold_35_curated_12
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13519..14529)
DNA (1011bp) protein (337aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JXS1_DESFR rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EFL50844.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
NAD-dependent epimerase/dehydratase
S5_scaffold_35_curated_13

Not on your lists

comp(14622..15203)
DNA (582bp) protein (194aa)
phosphoheptose isomerase (EC:5.3.1.-) id=14428694 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Latescibacteria tax=bin3_NC10 organism_group=NC10
Marine sediment metagenome DNA, contig: S01H1_S08799 {ECO:0000313|EMBL:GAG12744.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sugar isomerase (SIS)
S5_scaffold_35_curated_14
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15216..16460)
DNA (1245bp) protein (415aa)
Hypothetical membrane protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XQX3_DESMR rbh
Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:KHK00819.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
hypothetical protein rbh
S5_scaffold_35_curated_15
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16476..19343)
DNA (2868bp) protein (956aa)
Uncharacterized protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JSI0_DESFR rbh
Uncharacterized protein {ECO:0000313|EMBL:KHK00820.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
hypothetical protein rbh
S5_scaffold_35_curated_16
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19343..20899)
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JSI2_DESFR rbh
Uncharacterized protein {ECO:0000313|EMBL:EFL52951.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
hypothetical protein rbh
S5_scaffold_35_curated_17
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20892..23762)
DNA (2871bp) protein (957aa)
Uncharacterized protein n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6GKR7_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKO37586.1}; Flags: Precursor;; TaxID=1206767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus str. Maddingley MBC34.;"
hypothetical protein rbh
S5_scaffold_35_curated_18
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23911..25074)
DNA (1164bp) protein (388aa)
Glycosyltransferase n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6FG81_9DELT rbh
Glycosyltransferase {ECO:0000313|EMBL:EKO37587.1}; Flags: Precursor;; TaxID=1206767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus str. Maddingley MBC34.;"
glycosyltransferase rbh
S5_scaffold_35_curated_19
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25085..25990)
DNA (906bp) protein (302aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
GDP-L-fucose synthase n=1 Tax=Desulfovibrio sp. U5L RepID=I2PYR1_9DELT rbh
fcl; GDP-L-fucose synthetase rbh
S5_scaffold_35_curated_20
unknown

Not on your lists

comp(26203..26478)
DNA (276bp) protein (92aa)

This feature has no annotations

S5_scaffold_35_curated_21
BJP_IG2102_Desulfovibrionales_64_25, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26541..27203)
DNA (663bp) protein (221aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1) rbh
Ribulose-phosphate 3-epimerase n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6C1Q5_DESAD rbh
Tax=BJP_IG2102_Desulfovibrionales_64_25
S5_scaffold_35_curated_22
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27203..27655)
DNA (453bp) protein (151aa)
Putative transcriptional regulator, AsnC family n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LR67_DESBD
Heme biosynthesis protein {ECO:0000313|EMBL:KHK00562.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
AsnC family transcriptional regulator
S5_scaffold_35_curated_23
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27792..29258)
DNA (1467bp) protein (489aa)
hypothetical protein n=1 Tax=Geitlerinema sp. PCC 7105 RepID=UPI0003496930
Uncharacterized protein {ECO:0000313|EMBL:KHK02039.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
pentapeptide repeat protein
S5_scaffold_35_curated_24
Desulfovibrio sp. A2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29372..30559)
DNA (1188bp) protein (396aa)
Radical SAM domain protein n=2 Tax=Desulfovibrio vulgaris RepID=A1VFC8_DESVV rbh
radical SAM domain-containing protein rbh
Radical SAM superfamily protein {ECO:0000313|EMBL:EGY24347.1}; TaxID=298701 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. A2.;"
S5_scaffold_35_curated_25
Desulfovibrio hydrothermalis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30563..31543)
DNA (981bp) protein (327aa)
hemB; delta-aminolevulinic acid dehydratase (porphobilinogen synthase) (EC:4.2.1.24) rbh
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1121451 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio hydrothermalis AM13 = DSM 14728.;"
Delta-aminolevulinic acid dehydratase n=1 Tax=Desulfovibrio hydrothermalis AM13 = DSM 14728 RepID=L0RG60_9DELT rbh
S5_scaffold_35_curated_26
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31949..33130)
DNA (1182bp) protein (394aa)
Radical SAM domain protein n=3 Tax=Desulfovibrio vulgaris RepID=A1VFC6_DESVV rbh
radical SAM protein rbh
Radical SAM domain protein {ECO:0000313|EMBL:AAS95337.1}; TaxID=882 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB; 8303).;"
S5_scaffold_35_curated_27
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33358..34107)
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E055_9GAMM
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGV31783.1}; Flags: Precursor;; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus drewsii AZ1.;"
S5_scaffold_35_curated_28
Desulfarculus baarsii, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34118..34900)
DNA (783bp) protein (261aa)
Nickel transport complex, NikM subunit, transmembrane n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QKE2_DESB2 rbh
nickel transport complex transmembrane protein NikM rbh
Nickel transport complex, NikM subunit, transmembrane {ECO:0000313|EMBL:ADK86035.1}; Flags: Precursor;; TaxID=644282 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source="Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 /; 2st14).;"
S5_scaffold_35_curated_29
unknown

Not on your lists

comp(34987..35727)
DNA (741bp) protein (247aa)

This feature has no annotations

S5_scaffold_35_curated_30
Desulfovibrio gigas, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35946..36635
DNA (690bp) protein (230aa)
Putative bacterial regulatory s, gntR family protein n=1 Tax=Desulfovibrio gigas DSM 1382 = ATCC 19364 RepID=T2GD03_DESGI
putative bacterial regulatory s, gntR family protein
Putative bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:AGW14173.1}; TaxID=1121448 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio gigas DSM 1382 = ATCC 19364.;"
Displaying items 1-30 of 261 in total

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