ggKbase home page

S5_scaffold_14_curated

Search features with annotation key words

Displaying items 1-30 of 276 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_14_curated_1
unknown

Not on your lists

2..712
DNA (711bp) protein (237aa)

This feature has no annotations

S5_scaffold_14_curated_2
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

735..1181
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003645970
Phage-associated protein {ECO:0000313|EMBL:EDN70046.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
hypothetical protein
S5_scaffold_14_curated_3
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1178..1615
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BTT6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EDN70047.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
hypothetical protein
S5_scaffold_14_curated_4
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1728..2294)
DNA (567bp) protein (189aa)
Uncharacterized protein {ECO:0000313|EMBL:KFF73558.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
S5_scaffold_14_curated_5
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2294..2506)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. U5L RepID=I2PZY9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EIG53095.1}; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
S5_scaffold_14_curated_6
unknown

Not on your lists

2643..2924
DNA (282bp) protein (94aa)

This feature has no annotations

S5_scaffold_14_curated_7
unknown

Not on your lists

2917..3159
DNA (243bp) protein (81aa)

This feature has no annotations

S5_scaffold_14_curated_8
unknown

Not on your lists

comp(3176..3382)
DNA (207bp) protein (69aa)

This feature has no annotations

S5_scaffold_14_curated_9
unknown

Not on your lists

comp(3616..3894)
DNA (279bp) protein (93aa)

This feature has no annotations

S5_scaffold_14_curated_10
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4152..4910)
DNA (759bp) protein (253aa)
Methyltransferase small n=1 Tax=Desulfovibrio desulfuricans (strain G20) RepID=Q30VK2_DESDG
tRNA (Adenine37-N(6))-methyltransferase TrmN6 {ECO:0000313|EMBL:KHK01016.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
methyltransferase small
S5_scaffold_14_curated_11
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4921..6462)
DNA (1542bp) protein (514aa)
Integral membrane protein MviN n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JV05_DESFR rbh
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
hypothetical protein rbh
S5_scaffold_14_curated_12
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6580..8046)
DNA (1467bp) protein (489aa)
MscS Mechanosensitive ion channel n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JVR7_DESFR rbh
Uncharacterized protein {ECO:0000313|EMBL:KHK03145.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
hypothetical protein rbh
S5_scaffold_14_curated_13
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8129..8956
DNA (828bp) protein (276aa)
Hydrolase, TatD family n=3 Tax=Desulfovibrio vulgaris RepID=A1V9U3_DESVV rbh
Putative deoxyribonuclease YcfH {ECO:0000313|EMBL:KHK03146.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
TatD family hydrolase rbh
S5_scaffold_14_curated_14
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8976..9221)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XUG1_DESMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH76178.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
S5_scaffold_14_curated_15
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9562..9954
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00036D1ACB
Uncharacterized protein {ECO:0000313|EMBL:KJS40071.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
response regulator receiver protein
S5_scaffold_14_curated_16
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10014..11063)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QD86_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EHJ46392.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
hypothetical protein
S5_scaffold_14_curated_17
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11078..11818)
DNA (741bp) protein (247aa)
ABC-type transporter, periplasmic subunit family 3 n=1 Tax=Desulfovibrio sp. X2 RepID=S7VB17_9DELT
ABC transporter substrate-binding protein
ABC-type transporter, periplasmic subunit family 3 {ECO:0000313|EMBL:EPR43914.1}; Flags: Precursor;; TaxID=941449 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. X2.;"
S5_scaffold_14_curated_18
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11919..12260)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6GV46_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EKO40740.1}; Flags: Precursor;; TaxID=1206767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus str. Maddingley MBC34.;"
hypothetical protein
S5_scaffold_14_curated_19
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12318..12905)
DNA (588bp) protein (196aa)
D-heptose-1-phosphate adenylyltransferase n=1 Tax=Desulfovibrio africanus PCS RepID=M5PPX0_DESAF
D-heptose-1-phosphate adenylyltransferase {ECO:0000313|EMBL:EMG36059.1}; Flags: Precursor;; TaxID=1262666 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus PCS.;"
rfaE bifunctional protein
S5_scaffold_14_curated_20
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12905..13717)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1K2F2_DESFR rbh
Uncharacterized protein {ECO:0000313|EMBL:EFL49209.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
hypothetical protein rbh
S5_scaffold_14_curated_21
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13910..14134
DNA (225bp) protein (75aa)
Putative anti-sigma regulatory factor, serine/threonine protein kinase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LQJ6_SYNFM
putative anti-sigma regulatory factor
Putative anti-sigma regulatory factor, serine/threonine protein kinase {ECO:0000313|EMBL:ABK19698.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
S5_scaffold_14_curated_22
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14447..14785
DNA (339bp) protein (113aa)
Anti-sigma factor antagonist n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XR60_DESMR
anti-sigma factor antagonist family protein
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
S5_scaffold_14_curated_23
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14788..15420
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1K2F5_DESFR
Uncharacterized protein {ECO:0000313|EMBL:EHJ46434.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
hypothetical protein
S5_scaffold_14_curated_24
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15443..17188
DNA (1746bp) protein (582aa)
Putative GTPase n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q2E7_9DELT rbh
Putative GTPase {ECO:0000313|EMBL:EIG53953.1}; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
hypothetical protein rbh
S5_scaffold_14_curated_25
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17252..17572
DNA (321bp) protein (107aa)
30S ribosomal protein S6 n=3 Tax=Desulfovibrio vulgaris RepID=RS6_DESVH
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000255|HAMAP-Rule:MF_00360}; TaxID=882 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB; 8303).;"
S5_scaffold_14_curated_26
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17576..17836
DNA (261bp) protein (87aa)
30S ribosomal protein S18 n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1K1Z4_DESFR
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
rpsR; 30S ribosomal protein S18
S5_scaffold_14_curated_27
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17847..18368
DNA (522bp) protein (174aa)
50S ribosomal protein L9 n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q2E0_9DELT
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
rplI; 50S ribosomal protein L9
S5_scaffold_14_curated_28
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18337..19791
DNA (1455bp) protein (485aa)
Replicative DNA helicase n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q2D9_9DELT rbh
Replicative DNA helicase {ECO:0000313|EMBL:EIG53945.1}; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
dnaB; replicative DNA helicase rbh
S5_scaffold_14_curated_29
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19796..20287
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KQ53_OSCVS
Uncharacterized protein {ECO:0000313|EMBL:ETX06424.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
S5_scaffold_14_curated_30
unknown

Not on your lists

20301..21161
DNA (861bp) protein (287aa)

This feature has no annotations

Displaying items 1-30 of 276 in total

View Taxonomy