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S5_scaffold_108_curated

Search features with annotation key words

Displaying items 1-30 of 133 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_108_curated_1
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..208)
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RBF3_DESPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW16662.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
S5_scaffold_108_curated_2
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(205..447)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BIP1_RALP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS64714.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
S5_scaffold_108_curated_3
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(631..837)
DNA (207bp) protein (69aa)
Phage transcriptional regulator, AlpA n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q5Z0_9DELT
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:EHJ46927.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
hypothetical protein
S5_scaffold_108_curated_4
unknown

Not on your lists

comp(1034..1558)
DNA (525bp) protein (175aa)

This feature has no annotations

S5_scaffold_108_curated_5
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1594..2856)
DNA (1263bp) protein (421aa)
Integrase family protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q669_9DELT rbh
Integrase family protein {ECO:0000313|EMBL:EHJ47085.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
integrase
S5_scaffold_108_curated_6
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3023..3460)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. U5L RepID=I2PZ07_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EIG52763.1}; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
hypothetical protein
S5_scaffold_108_curated_7
Arthrospira maxima, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3554..4813)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=2 Tax=Arthrospira RepID=B5W8H9_ARTMA rbh
Uncharacterized protein {ECO:0000313|EMBL:EDZ92153.1}; Flags: Precursor;; TaxID=513049 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthrospira maxima CS-328.;"
hypothetical protein rbh
S5_scaffold_108_curated_8
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(4884..6383)
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QJ59_9CYAN rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGY58893.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
S5_scaffold_108_curated_9
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6550..7785
DNA (1236bp) protein (412aa)
S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase n=1 Tax=Salisaeta longa RepID=UPI0003B6651D rbh
S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase {ECO:0000313|EMBL:EIJ43173.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyltransferase rbh
S5_scaffold_108_curated_10
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7790..8425
DNA (636bp) protein (212aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Beggiatoa alba B18LD RepID=I3CHS9_9GAMM
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:EIJ43172.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
ubiquinone/menaquinone biosynthesis methylase
S5_scaffold_108_curated_11
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8557..9843)
DNA (1287bp) protein (429aa)
Putative ABC transporter permease protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XGP8_DESMR rbh
Macrolide export ATP-binding/permease protein MacB {ECO:0000313|EMBL:KHK01539.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
ABC transporter permease rbh
S5_scaffold_108_curated_12
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9800..10519)
DNA (720bp) protein (240aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XGP7_DESMR rbh
ABC transporter ATP-binding protein rbh
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAH76205.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
S5_scaffold_108_curated_13
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10677..11873)
DNA (1197bp) protein (399aa)
Sec-independent protein translocase protein TatC n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6GAL3_9DELT rbh
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1206767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus str. Maddingley MBC34.;"
tatC; Sec-independent protein translocase TatC rbh
S5_scaffold_108_curated_14
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11870..12958)
DNA (1089bp) protein (363aa)
Protein-export membrane protein SecF n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q4X4_9DELT rbh
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
secF; protein-export membrane protein SecF rbh
S5_scaffold_108_curated_15
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(13216..14148)
DNA (933bp) protein (311aa)
Mg2 transporter protein CorA family protein n=1 Tax=Bacillus methanolicus MGA3 RepID=I3DUB2_BACMT
Mg2 transporter protein CorA family protein
Tax=RBG_19FT_COMBO_JS1_35_14_curated
S5_scaffold_108_curated_16
unknown

Not on your lists

comp(14215..14538)
DNA (324bp) protein (108aa)

This feature has no annotations

S5_scaffold_108_curated_17
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14740..15585)
DNA (846bp) protein (282aa)
Protein HflC n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3YUG1_DESAF rbh
HflC protein rbh
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus str. Walvis Bay.;"
S5_scaffold_108_curated_18
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15588..16658)
DNA (1071bp) protein (357aa)
HflK protein n=1 Tax=Desulfovibrio sp. U5L RepID=I2PZ10_9DELT rbh
HflK protein {ECO:0000313|EMBL:EIG52766.1}; Flags: Precursor;; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
hflK; HflK protein rbh
S5_scaffold_108_curated_19
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16695..18062
DNA (1368bp) protein (456aa)
Phosphomannomutase n=1 Tax=Desulfovibrio sp. U5L RepID=I2PZ09_9DELT rbh
Phosphomannomutase {ECO:0000313|EMBL:EIG52765.1}; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I rbh
S5_scaffold_108_curated_20
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18066..19379
DNA (1314bp) protein (438aa)
Secretion protein HlyD family protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XGP6_DESMR rbh
secretion protein HlyD family protein rbh
Secretion protein HlyD family protein {ECO:0000313|EMBL:BAH76204.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
S5_scaffold_108_curated_21
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19680..20861)
DNA (1182bp) protein (394aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Desulfovibrio sp. U5L RepID=I2PZ15_9DELT
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:EIG52771.1}; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
response regulator receiver protein
S5_scaffold_108_curated_22
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21043..21960)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1K0S6_DESFR
Uncharacterized protein {ECO:0000313|EMBL:EFL49764.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
hypothetical protein
S5_scaffold_108_curated_23
GWA2_Desulfovibrionales_65_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22084..23811
DNA (1728bp) protein (576aa)
Aldehyde:ferredoxin oxidoreductase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PNG8_DESSD rbh
aldehyde:ferredoxin oxidoreductase rbh
Tax=GWA2_Desulfovibrionales_65_9_curated
S5_scaffold_108_curated_24
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23918..24520)
DNA (603bp) protein (201aa)
HhH-GPD superfamily base excision DNA repair protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HHV0_METFS
HhH-GPD superfamily base excision DNA repair protein
HhH-GPD superfamily base excision DNA repair protein {ECO:0000313|EMBL:AGB03605.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
S5_scaffold_108_curated_25
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24492..24977)
DNA (486bp) protein (162aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; O-6-methylguanine-DNA-alkyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; TaxID=1434104 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens MM1.;"
Methylated-DNA--protein-cysteine methyltransferase id=3843728 bin=GWC2_Clostridiales_40_7 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
methylated-DNA--protein-cysteine methyltransferase
S5_scaffold_108_curated_26
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24974..25558)
DNA (585bp) protein (195aa)
Adenosine deaminase n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A7W6_DESDJ
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EXG88422.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
adenosine deaminase
S5_scaffold_108_curated_27
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25984..26508)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q3R1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EIG54417.1}; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
hypothetical protein
S5_scaffold_108_curated_28
CG_Desulfovib_01, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26518..27138)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3Z1W0_DESAF
hypothetical protein
Tax=CG_Desulfovib_01
S5_scaffold_108_curated_29
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27286..27489
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XLB8_DESMR
Uncharacterized protein {ECO:0000313|EMBL:KHK03875.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
hypothetical protein
S5_scaffold_108_curated_30
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27648..29009
DNA (1362bp) protein (454aa)
6-phosphofructokinase {ECO:0000313|EMBL:EHJ47641.1}; EC=2.7.1.11 {ECO:0000313|EMBL:EHJ47641.1};; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
6-phosphofructokinase n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q6M8_9DELT rbh
diphosphate--fructose-6-phosphate 1-phosphotransferase rbh
Displaying items 1-30 of 133 in total

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