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S5_scaffold_164_curated

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_164_curated_1
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..973
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. Lz4W RepID=M5QE11_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EMI05728.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
hypothetical protein
S5_scaffold_164_curated_2
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1117..2985)
DNA (1869bp) protein (623aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3EA45_GEOLS rbh
multi-sensor signal transduction histidine kinase rbh
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:ACD93873.1}; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
S5_scaffold_164_curated_3
Desulfovibrio hydrothermalis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3331..3825)
DNA (495bp) protein (165aa)
purE; N5-carboxyaminoimidazole ribonucleotide mutase (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1121451 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio hydrothermalis AM13 = DSM 14728.;"
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Desulfovibrio hydrothermalis AM13 = DSM 14728 RepID=L0RCS1_9DELT
S5_scaffold_164_curated_4
CG_Desulfovib_01, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3822..5102)
DNA (1281bp) protein (427aa)
phosphoribosylamine/glycine ligase (EC:6.3.4.13) rbh
Phosphoribosylamine--glycine ligase n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6BSM6_DESAD rbh
Tax=CG_Desulfovib_01
S5_scaffold_164_curated_5
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5267..5725
DNA (459bp) protein (153aa)
Fe2+/Zn2+ uptake regulation protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C5Q9_DESTA
Fe2+/Zn2+ uptake regulation protein
Fe2+/Zn2+ uptake regulation protein {ECO:0000313|EMBL:AFM24900.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
S5_scaffold_164_curated_6
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5843..6337
DNA (495bp) protein (165aa)
Rubrerythrin n=1 Tax=Desulfovibrio africanus PCS RepID=M5PPI8_DESAF
rubrerythrin
Tax=BJP_IG2069_Desfulfarculales_53_13
S5_scaffold_164_curated_7
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6494..6655
DNA (162bp) protein (54aa)
rubredoxin n=1 Tax=Desulfovibrio longus RepID=UPI0003B2F622
rubredoxin-type Fe(Cys)4 protein
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus str. Walvis Bay.;"
S5_scaffold_164_curated_8
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6822..8279)
DNA (1458bp) protein (486aa)
Response regulator receiver modulated metal dependent phosphohydrolase n=1 Tax=Desulfovibrio sp. X2 RepID=S7UYG5_9DELT rbh
Response regulator receiver modulated metal dependent phosphohydrolase {ECO:0000313|EMBL:EPR37408.1}; TaxID=941449 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. X2.;"
response regulator receiver modulated metal dependent phosphohydrolase rbh
S5_scaffold_164_curated_9
BJP_IG2102_Desulfovibrionales_64_25, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8493..11153
DNA (2661bp) protein (887aa)
Histidine kinase n=1 Tax=Desulfovibrio sp. X2 RepID=S7UTM6_9DELT rbh
histidine kinase rbh
Tax=BJP_IG2102_Desulfovibrionales_64_25
S5_scaffold_164_curated_10
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11179..12561
DNA (1383bp) protein (461aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7URE7_9DELT
hypothetical protein
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:EPR34878.1}; TaxID=1121439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alkalitolerans DSM 16529.;"
S5_scaffold_164_curated_11
Desulfovibrio aespoeensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12664..12981
DNA (318bp) protein (106aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2) RepID=E6VYH2_DESAO
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADU62735.1}; TaxID=643562 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2).;"
S5_scaffold_164_curated_12
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13069..15561)
DNA (2493bp) protein (831aa)
Methyl-accepting chemotaxis sensory transducer with Cache sensor n=1 Tax=Desulfovibrio sp. X2 RepID=S7UXZ1_9DELT rbh
Methyl-accepting chemotaxis sensory transducer with Cache sensor {ECO:0000313|EMBL:EPR37203.1}; TaxID=941449 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. X2.;"
Methyl-accepting chemotaxis sensory transducer with Cache sensor
S5_scaffold_164_curated_13
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15738..18665)
DNA (2928bp) protein (976aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. X2 RepID=S7V6R8_9DELT
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:EPR40233.1}; TaxID=941449 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. X2.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
S5_scaffold_164_curated_14
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18668..19465)
DNA (798bp) protein (266aa)
Cytochrome c-552/DMSO reductase-like, heme-binding domain-containing protein id=3633784 bin=GWC2_Pelobacter_58_13 species=Thiothrix nivea genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good + rbh
hypothetical protein
Tax=GWC2_Pelobacteraceae_58_13_curated
S5_scaffold_164_curated_15
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20078..21343
DNA (1266bp) protein (422aa)
Coenzyme F390 synthetase n=2 Tax=Desulfovibrio magneticus RepID=K6H7W0_9DELT rbh
phenylacetate-coenzyme A ligase rbh
Putative phenylacetate-coenzyme A ligase {ECO:0000313|EMBL:BAH75190.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
S5_scaffold_164_curated_16
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21355..22527
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q7I8_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:KHK00694.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
hypothetical protein
S5_scaffold_164_curated_17
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22527..23357
DNA (831bp) protein (277aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
Formamidopyrimidine-DNA glycosylase n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JV06_DESFR
mutM; formamidopyrimidine-DNA glycosylase
S5_scaffold_164_curated_18
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23471..24406
DNA (936bp) protein (312aa)
Peptidoglycan-binding lysin domain protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q6D8_9DELT
Peptidoglycan-binding lysin domain protein {ECO:0000313|EMBL:EHJ47311.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
hypothetical protein
S5_scaffold_164_curated_19
unknown

Not on your lists

comp(24274..24957)
DNA (684bp) protein (228aa)

This feature has no annotations

S5_scaffold_164_curated_20
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24995..25456)
DNA (462bp) protein (154aa)
Phosphatidylglycerophosphatase A {ECO:0000256|PIRNR:PIRNR006162}; EC=3.1.3.27 {ECO:0000256|PIRNR:PIRNR006162};; Phosphatidylglycerolphosphate phosphatase A {ECO:0000256|PIRNR:PIRNR006162}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
Phosphatidylglycerophosphatase A n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XMU9_DESMR
pgpA; phosphatidylglycerophosphatase A
S5_scaffold_164_curated_21
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25504..26433)
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Desulfovibrio longus RepID=UPI0003B6D876 rbh
hypothetical protein rbh
Tax=BJP_08E140C01_Desulfomicrobium_58_14
S5_scaffold_164_curated_22
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26510..27115)
DNA (606bp) protein (202aa)
Maf-like protein dsat_2384 n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7TEA1_9DELT
Maf-like protein dsat_2384 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1121439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alkalitolerans DSM 16529.;"
maf protein
S5_scaffold_164_curated_23
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27455..28711
DNA (1257bp) protein (419aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
Serine hydroxymethyltransferase n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XNK8_DESMR rbh
glyA; serine hydroxymethyltransferase rbh
S5_scaffold_164_curated_24
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28724..30664)
DNA (1941bp) protein (647aa)
Nitrate reductase n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3YV62_DESAF rbh
nitrate reductase rbh
Nitrate reductase {ECO:0000313|EMBL:EGJ48380.1}; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus str. Walvis Bay.;"
S5_scaffold_164_curated_25
BJP_IG2102_Desulfovibrionales_64_25, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30671..32029)
DNA (1359bp) protein (453aa)
Dihydrolipoyl dehydrogenase (EC:1.8.1.4) rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Desulfovibrio longus RepID=UPI0003B79EE7 rbh
Tax=BJP_IG2102_Desulfovibrionales_64_25
S5_scaffold_164_curated_26
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32384..33787
DNA (1404bp) protein (468aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
fumC; Fumarate hydratase class II 2 (EC:4.2.1.2)
Fumarate hydratase class II n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JUE0_DESFR rbh
S5_scaffold_164_curated_27
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33834..35462
DNA (1629bp) protein (543aa)
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+)) {ECO:0000313|EMBL:EFL52069.1}; EC=1.1.1.40 {ECO:0000313|EMBL:EFL52069.1};; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
maeB2; malate dehydrogenase (EC:1.1.1.40) rbh
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+)) n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JUD9_DESFR rbh
S5_scaffold_164_curated_28
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35508..37334
DNA (1827bp) protein (609aa)
Methyl-accepting chemotaxis protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XMX4_DESMR
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:KHK03785.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
methyl-accepting chemotaxis protein
S5_scaffold_164_curated_29
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

37522..37797
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Spirulina subsalsa RepID=UPI0002D53F38
hypothetical protein
Tax=RBG_13_Caldithrix_44_9_curated
S5_scaffold_164_curated_30
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37775..38056
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Rhizobium radiobacter RepID=UPI00035EAE88
Uncharacterized protein {ECO:0000313|EMBL:KDR90237.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;"
hypothetical protein
Displaying items 1-30 of 86 in total

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