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S5_scaffold_633_curated

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_633_curated_1
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..772)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QB82_9DELT
DNA primase {ECO:0000313|EMBL:KHK00372.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
hypothetical protein rbh
S5_scaffold_633_curated_2
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(765..956)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. U5L RepID=I2PX41_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KHK00371.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
hypothetical protein
S5_scaffold_633_curated_3
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(953..1486)
DNA (534bp) protein (178aa)
Conjugative transfer signal peptidase TraF n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QB80_9DELT
Conjugative transfer signal peptidase TraF {ECO:0000313|EMBL:EHJ48822.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
putative conjugative transfer signal peptidase TraF
S5_scaffold_633_curated_4
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1483..3480)
DNA (1998bp) protein (666aa)
TRAG family protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QB79_9DELT
Type IV secretion system protein VirD4 {ECO:0000313|EMBL:KHK00369.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
putative TRAG family protein
S5_scaffold_633_curated_5
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3537..4739)
DNA (1203bp) protein (401aa)
Type IV secretory pathway, VirB10 component n=1 Tax=Desulfovibrio sp. U5L RepID=I2PX44_9DELT
Conjugative transfer protein TrbI {ECO:0000313|EMBL:KHK00368.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
Conjugation TrbI family protein
S5_scaffold_633_curated_6
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4742..5854)
DNA (1113bp) protein (371aa)
Shufflon domain protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QB77_9DELT
PilV {ECO:0000313|EMBL:KHK00367.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
hypothetical protein rbh
S5_scaffold_633_curated_7
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5869..6291)
DNA (423bp) protein (141aa)
PilM inner membrane family protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QB76_9DELT
PilM inner membrane family protein {ECO:0000313|EMBL:EHJ48818.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
S5_scaffold_633_curated_8
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6288..7310)
DNA (1023bp) protein (341aa)
Type II secretion system protein E n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QB75_9DELT
Type II secretion system protein E {ECO:0000313|EMBL:EHJ48817.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
Type II secretion system protein E
S5_scaffold_633_curated_9
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7313..7786)
DNA (474bp) protein (158aa)
PilS domain-containing protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QB74_9DELT
PilS domain-containing protein {ECO:0000313|EMBL:EHJ48816.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
PilS domain-containing protein
S5_scaffold_633_curated_10
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7860..8915)
DNA (1056bp) protein (352aa)
Type II secretion system F domain protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QB73_9DELT
Type II secretion system F domain protein {ECO:0000313|EMBL:EHJ48815.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
type II secretion system protein
S5_scaffold_633_curated_11
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8912..10453)
DNA (1542bp) protein (514aa)
Type II secretion system protein E n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QB72_9DELT
Twitching motility protein PilT {ECO:0000313|EMBL:KHK00243.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
Type II secretion system protein E
S5_scaffold_633_curated_12
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10462..11100)
DNA (639bp) protein (213aa)
Type IV pilus biogenesis PilP n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QB71_9DELT
Type IV pilus biogenesis PilP {ECO:0000313|EMBL:EHJ48813.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
S5_scaffold_633_curated_13
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11160..12407)
DNA (1248bp) protein (416aa)
Pilin accessory family protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QB70_9DELT
Pilin accessory family protein {ECO:0000313|EMBL:EHJ48812.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
S5_scaffold_633_curated_14
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12411..14030)
DNA (1620bp) protein (540aa)
Type II and III secretion system protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QB69_9DELT
Outer membrane lipoprotein BfpB {ECO:0000313|EMBL:KHK00247.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
Type II secretory pathway component PulD-like protein
S5_scaffold_633_curated_15
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14032..15348)
DNA (1317bp) protein (439aa)
Conjugal transfer TrbH family protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QB68_9DELT
Conjugal transfer TrbH family protein {ECO:0000313|EMBL:EHJ48810.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
conserved exported protein of unknown function
S5_scaffold_633_curated_16
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15357..16316)
DNA (960bp) protein (320aa)
P-type conjugative transfer protein TrbG n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QB67_9DELT rbh
P-type conjugative transfer protein TrbG {ECO:0000313|EMBL:EHJ48809.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
P-type conjugative transfer protein TrbG
S5_scaffold_633_curated_17
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16324..17052)
DNA (729bp) protein (243aa)
VirB8 family protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QB66_9DELT
Conjugative transfer protein TrbF {ECO:0000313|EMBL:KHK00250.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
Conjugal transfer protein
S5_scaffold_633_curated_18
unknown

Not on your lists

comp(17454..17909)
DNA (456bp) protein (152aa)

This feature has no annotations

S5_scaffold_633_curated_19
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17884..19149)
DNA (1266bp) protein (422aa)
P-type conjugative transfer protein TrbL n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QB65_9DELT
Conjugative transfer protein TrbL {ECO:0000313|EMBL:KHK00336.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
P-type conjugative transfer protein TrbL
S5_scaffold_633_curated_20
unknown

Not on your lists

comp(19151..19549)
DNA (399bp) protein (133aa)

This feature has no annotations

S5_scaffold_633_curated_21
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19558..20418)
DNA (861bp) protein (287aa)
P-type conjugative transfer protein TrbJ n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QB64_9DELT
P-type conjugative transfer protein TrbJ {ECO:0000313|EMBL:EHJ48806.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
P-type conjugative transfer protein TrbJ
S5_scaffold_633_curated_22
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20415..23033)
DNA (2619bp) protein (873aa)
CagE, TrbE, VirB component of type IV transporter system, conserved region n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QB63_9DELT
Conjugative transfer protein TrbE {ECO:0000313|EMBL:KHK00254.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
trbE; Conjugal transfer protein trbE
Displaying 22 items

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