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S5_scaffold_42_curated

Search features with annotation key words

Displaying items 1-30 of 191 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_42_curated_1
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1388)
DNA (1386bp) protein (462aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1121439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alkalitolerans DSM 16529.;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7T6Y1_9DELT
two-component hybrid sensor and regulator
S5_scaffold_42_curated_2
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1594..3354)
DNA (1761bp) protein (587aa)
Sulfate transporter n=2 Tax=Desulfovibrio vulgaris RepID=B8DRY4_DESVM rbh
sulfate transporter rbh
Sulfate transporter {ECO:0000313|EMBL:ACL08523.1}; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;"
S5_scaffold_42_curated_3
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3746..4819)
DNA (1074bp) protein (358aa)
Peptide chain release factor 1 n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q2T8_9DELT rbh
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
prfA; peptide chain release factor 1 rbh
S5_scaffold_42_curated_4
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4835..5758)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JZ98_DESFR rbh
Uncharacterized protein {ECO:0000313|EMBL:EFL50258.1}; Flags: Precursor;; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
hypothetical protein rbh
S5_scaffold_42_curated_5
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6015..6233)
DNA (219bp) protein (73aa)
50S ribosomal protein L31 n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q2U0_9DELT
50S ribosomal protein L31 {ECO:0000256|RuleBase:RU000564}; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
rpmE; 50S ribosomal protein L31
S5_scaffold_42_curated_6
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6435..7745
DNA (1311bp) protein (437aa)
Thiamine biosynthesis protein ThiC n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JZA0_DESFR rbh
Thiamine biosynthesis protein ThiC {ECO:0000313|EMBL:EFL50260.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
thiC; thiamine biosynthesis protein ThiC rbh
S5_scaffold_42_curated_7
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7872..8618
DNA (747bp) protein (249aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JZA1_DESFR rbh
gpmA; putative phosphoglycerate mutase 1 family rbh
S5_scaffold_42_curated_8
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8687..12961)
DNA (4275bp) protein (1425aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q5G3_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:EIG55019.1}; Flags: Precursor;; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
hypothetical protein rbh
S5_scaffold_42_curated_9
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12971..14125
DNA (1155bp) protein (385aa)
A/G-specific adenine glycosylase n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XPE4_DESMR rbh
mutY; A/G-specific adenine glycosylase rbh
A/G-specific adenine glycosylase {ECO:0000313|EMBL:BAH75125.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
S5_scaffold_42_curated_10
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14259..16379)
DNA (2121bp) protein (707aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
Sensor histidine kinase n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XTI0_DESMR rbh
sensor histidine kinase rbh
S5_scaffold_42_curated_11
Desulfovibrio gigas, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16392..17441)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Desulfovibrio gigas DSM 1382 = ATCC 19364 RepID=T2GDP3_DESGI rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGW14022.1}; TaxID=1121448 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio gigas DSM 1382 = ATCC 19364.;"
S5_scaffold_42_curated_12
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17543..18457)
DNA (915bp) protein (305aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=882 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB; 8303).;"
Dihydroorotate dehydrogenase n=1 Tax=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) RepID=A1V9I0_DESVV rbh
dihydroorotate dehydrogenase family protein rbh
S5_scaffold_42_curated_13
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18544..19329)
DNA (786bp) protein (262aa)
2-polyprenylphenol hydroxylase-like oxidoreductase n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6GQE6_9DELT rbh
Dihydroorotate dehydrogenase electron transfer subunit {ECO:0000313|EMBL:KHK03589.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
pyrK; dihydroorotate dehydrogenase electron transfer subunit rbh
S5_scaffold_42_curated_14
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19570..20763
DNA (1194bp) protein (398aa)
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q5Q9_9DELT rbh
Putative transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EHJ49618.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
hypothetical protein rbh
S5_scaffold_42_curated_15
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20760..21539
DNA (780bp) protein (260aa)
Chemotaxis protein MotA n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XPD3_DESMR rbh
Flagellar motor rotation protein MotA {ECO:0000313|EMBL:KHK03587.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
motA; chemotaxis protein MotA rbh
S5_scaffold_42_curated_16
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21549..22415
DNA (867bp) protein (289aa)
OmpA/MotB domain protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1K1H0_DESFR
OmpA/MotB domain protein {ECO:0000313|EMBL:EFL49525.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
motB; chemotaxis protein MotB
S5_scaffold_42_curated_17
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22412..23230
DNA (819bp) protein (273aa)
Tetratricopeptide TPR_2 repeat-containing protein n=1 Tax=Desulfovibrio sp. X2 RepID=S7VE19_9DELT
Tetratricopeptide TPR_2 repeat-containing protein {ECO:0000313|EMBL:EPR42683.1}; TaxID=941449 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. X2.;"
hypothetical protein
S5_scaffold_42_curated_18
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23598..24224
DNA (627bp) protein (209aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; TaxID=1121439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alkalitolerans DSM 16529.;"
FMN-dependent NADH-azoreductase n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7TGN9_9DELT
FMN-dependent NADH-azoreductase
S5_scaffold_42_curated_19
unknown

Not on your lists

24887..25063
DNA (177bp) protein (59aa)

This feature has no annotations

S5_scaffold_42_curated_20
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25220..26320)
DNA (1101bp) protein (367aa)
Response regulator receiver protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JUG3_DESFR rbh
Response regulator receiver protein {ECO:0000313|EMBL:EFL52093.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
response regulator receiver protein rbh
S5_scaffold_42_curated_21
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26378..27139)
DNA (762bp) protein (254aa)
Metal-dependent phosphohydrolase HD sub domain-containing protein n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3YV64_DESAF
metal-dependent phosphohydrolase HD sub domain-containing protein
Metal-dependent phosphohydrolase HD sub domain-containing protein {ECO:0000313|EMBL:EGJ48382.1}; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus str. Walvis Bay.;"
S5_scaffold_42_curated_22
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27272..27670
DNA (399bp) protein (133aa)
Response regulator receiver protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JUG0_DESFR
Response regulator receiver protein {ECO:0000313|EMBL:EFL52090.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
chemotaxis protein CheY
S5_scaffold_42_curated_23
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27670..28440
DNA (771bp) protein (257aa)
Import inner membrane translocase subunit Tim44 n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X275_DESRD
import inner membrane translocase subunit Tim44
Import inner membrane translocase subunit Tim44 {ECO:0000313|EMBL:ACV68398.1}; Flags: Precursor;; TaxID=485915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfohalobium.;" source="Desulfohalobium retbaense (strain DSM 5692).;"
S5_scaffold_42_curated_24
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28497..29537)
DNA (1041bp) protein (347aa)
hypothetical protein n=2 Tax=Sphingomonas melonis RepID=UPI00036EDF09
Uncharacterized protein {ECO:0000313|EMBL:EXL01276.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
S5_scaffold_42_curated_25
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29644..30582)
DNA (939bp) protein (313aa)
Aminotransferase class IV n=1 Tax=Desulfovibrio desulfuricans ND132 RepID=F0JGR0_DESDE rbh
class IV aminotransferase rbh
Aminotransferase class IV {ECO:0000313|EMBL:EGB13929.1}; TaxID=641491 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio desulfuricans ND132.;"
S5_scaffold_42_curated_26
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30584..31603)
DNA (1020bp) protein (340aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Flags: Precursor;; TaxID=1206767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus str. Maddingley MBC34.;"
Aspartate-semialdehyde dehydrogenase n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6H513_9DELT rbh
asd; aspartate-semialdehyde dehydrogenase rbh
S5_scaffold_42_curated_27
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32047..32931)
DNA (885bp) protein (295aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
Methylenetetrahydrofolate reductase n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6FG53_9DELT rbh
metF; 5,10-methylenetetrahydrofolate reductase rbh
S5_scaffold_42_curated_28
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32952..33341)
DNA (390bp) protein (130aa)
NUDIX hydrolase n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q5P2_9DELT
NUDIX hydrolase {ECO:0000313|EMBL:EHJ49601.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
NUDIX hydrolase
S5_scaffold_42_curated_29
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33338..35302)
DNA (1965bp) protein (655aa)
ABC transporter related n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DIM2_DESVM rbh
ABC transporter rbh
ABC transporter related {ECO:0000313|EMBL:ACL09320.1}; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;"
S5_scaffold_42_curated_30
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35500..36729
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1K138_DESFR rbh
Uncharacterized protein {ECO:0000313|EMBL:KHK02125.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
hypothetical protein rbh
Displaying items 1-30 of 191 in total

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