ggKbase home page

S5_scaffold_137_curated_25

Organism: S5_RifleAc_Desulfovibrio_putealis_63_18_curated

near complete RP 52 / 55 BSCG 51 / 51 ASCG 11 / 38
Location: 28036..29283

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 412.0
  • Bit_score: 647
  • Evalue 1.20e-182
Diaminopimelate decarboxylase n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q1M4_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 412.0
  • Bit_score: 647
  • Evalue 8.20e-183
  • rbh
lysA; diaminopimelate decarboxylase similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 412.0
  • Bit_score: 642
  • Evalue 5.70e-182
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Desulfovibrio sp. U5L → Desulfovibrio → Desulfovibrionales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
ATGCATTTCTTCGAGTACAAGGACGGTCAACTCCACGCCGAGGGCGTCAGCGCTCAGGAACTGGCCAAGCAGTACGGCACGCCTCTCTACGTCTATTCTGCGGCCACCCTGCGCCGCCATTTCCAGGCGTTCGACTCCGCCTTCGACGGCCTGCCCCACCTCACCTGCTACTCGGTGAAGGCCAACTCCAACCTGAGCCTTTTGAAGCTCCTCAAGGAGTGCGGCGCGGGCATGGACATCGTCTCCGGGGGCGAGTTGCACCGCGCCCTGGCCGCCGGGGTTCCGGCCTCCAAGATCGTGTACTCGGGCGTGGGCAAGCGCGCGGACGAAATGCGCCAGGCCCTGGCCGCCGACATCCTCATGTTCAACGTGGAGTCCATGGGCGAGTTGGAACGCCTCTCCGCCGTGGCCTCGGACATGGGCAAGACCGCGCGCATAAGCCTTCGCATCAACCCGGACGTGGACCCCAAGACCCACCCCTACATCTCCACGGGCCTGAAGAAGAACAAGTTCGGCCTGGACATCGAGCAGTCCATGGCCGCCTATTCGCGCGCCATGGCCCTGCCCAACATCGAGCCCATCGGCATCGACTGCCACATCGGCTCGCAGCTGACCACCCTGGAACCCTTCATGGAAGCCTTGGACCGCATCATCCGCTTCTATGACCGGCTGAAGGGCATGGGCCTTCGCATTGAGTTCCTGGACCTGGGCGGGGGCCTGGGCATCACCTACAATGAGGAAGAGCCGCCCCACCCCGCAGAGTTCGGCAAGGCCCTGACCAACGTGCTGAAAGACCACCCCATGACGCTCATCCTGGAGCCGGGCCGGGTGATCGCTGGCAACTCCGGCGTCCTGCTCACCGAGGTTGTCTACACCAAGAAGACCCCCTCCAAGGACTTCATCATCGTGGACGCCGCCATGAACGATCTGGTGCGTCCCTCGCTCTACGGCTCCTTCCACGCCATCCGCGAGGTTACCCCCAAGGGACGCCCCGAGCTGAACGTGGACGTGGTCGGCCCCATCTGCGAGTCCGGCGACTTCCTGGCGCGCGACCGGGACATCCCCGGCGTGGAGTCCGGCGAACTGCTGGCCGTGTTCTCCGCCGGAGCCTACGGGTTCACCATGTCCTCCAACTACAACTCTCGCCCCCGCGCGGCCGAGGTGCTGGTGGATGGCAAAGAAGTCACCCTGGCCAGACGCCGCGAGACGTATGAGGACCTGATCGCCCTGGAAAAAGAAAACAAGTAA
PROTEIN sequence
Length: 416
MHFFEYKDGQLHAEGVSAQELAKQYGTPLYVYSAATLRRHFQAFDSAFDGLPHLTCYSVKANSNLSLLKLLKECGAGMDIVSGGELHRALAAGVPASKIVYSGVGKRADEMRQALAADILMFNVESMGELERLSAVASDMGKTARISLRINPDVDPKTHPYISTGLKKNKFGLDIEQSMAAYSRAMALPNIEPIGIDCHIGSQLTTLEPFMEALDRIIRFYDRLKGMGLRIEFLDLGGGLGITYNEEEPPHPAEFGKALTNVLKDHPMTLILEPGRVIAGNSGVLLTEVVYTKKTPSKDFIIVDAAMNDLVRPSLYGSFHAIREVTPKGRPELNVDVVGPICESGDFLARDRDIPGVESGELLAVFSAGAYGFTMSSNYNSRPRAAEVLVDGKEVTLARRRETYEDLIALEKENK*