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S5_scaffold_137_curated

Search features with annotation key words

Displaying items 1-30 of 109 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_137_curated_1
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1716)
DNA (1716bp) protein (572aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
Lon protease n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1K1G2_DESFR rbh
lon; ATP-dependent protease La rbh
S5_scaffold_137_curated_2
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1921..3174)
DNA (1254bp) protein (418aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1K1G1_DESFR rbh
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
clpX; ATP-dependent protease ATP-binding subunit ClpX rbh
S5_scaffold_137_curated_3
Desulfonatronum thiodismutans, Desulfonatronum, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3229..3987)
DNA (759bp) protein (253aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=159290 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfonatronumaceae; Desulfonatronum.;" source="Desulfonatronum thiodismutans.;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q699_9DELT rbh
ATP-dependent Clp protease proteolytic subunit rbh
S5_scaffold_137_curated_4
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4041..5351)
DNA (1311bp) protein (437aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
Trigger factor n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q6A0_9DELT rbh
tig; trigger factor rbh
S5_scaffold_137_curated_5
Desulfovibrio hydrothermalis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5435..7117)
DNA (1683bp) protein (561aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1121451 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio hydrothermalis AM13 = DSM 14728.;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Desulfovibrio hydrothermalis AM13 = DSM 14728 RepID=L0RFM9_9DELT rbh
PAS/PAC sensor signal transduction histidine kinase rbh
S5_scaffold_137_curated_6
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7101..8267)
DNA (1167bp) protein (389aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Desulfovibrio sp. X2 RepID=S7UU05_9DELT rbh
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:EPR37539.1}; TaxID=941449 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. X2.;"
Alcohol dehydrogenase rbh
S5_scaffold_137_curated_7
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8445..8795)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6GFC0_9DELT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKO39789.1}; TaxID=1206767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus str. Maddingley MBC34.;"
S5_scaffold_137_curated_8
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8814..9422)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7TDX1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPR34745.1}; TaxID=1121439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alkalitolerans DSM 16529.;"
hypothetical protein
S5_scaffold_137_curated_9
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9508..11079)
DNA (1572bp) protein (524aa)
ADP-heptose:LPS heptosyltransferase n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q273_9DELT rbh
ADP-heptose:LPS heptosyltransferase {ECO:0000313|EMBL:EIG53879.1}; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
glycosyl transferase family protein rbh
S5_scaffold_137_curated_10
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11206..12534
DNA (1329bp) protein (443aa)
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+)) {ECO:0000313|EMBL:EFL52154.1}; EC=1.1.1.40 {ECO:0000313|EMBL:EFL52154.1};; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+)) n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JTM5_DESFR rbh
NADP-dependent malic enzyme rbh
S5_scaffold_137_curated_11
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12731..14401
DNA (1671bp) protein (557aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; Flags: Precursor;; TaxID=1206767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus str. Maddingley MBC34.;"
Beta-glucosidase-like glycosyl hydrolase n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6GS64_9DELT rbh
beta-N-acetylhexosaminidase rbh
S5_scaffold_137_curated_12
bacterium UASB270, Bacteria

Not on your lists

14398..15285
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Desulfovibrio longus RepID=UPI0003B34211 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAK61217.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
hypothetical protein
S5_scaffold_137_curated_13
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15486..16214)
DNA (729bp) protein (243aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; TaxID=1206767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus str. Maddingley MBC34.;"
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6GHB4_9DELT
aat; leucyl/phenylalanyl-tRNA--protein transferase
S5_scaffold_137_curated_14
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16342..18657)
DNA (2316bp) protein (772aa)
ATP-dependent Clp protease ATP-binding subunit clpA n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q0W3_9DELT rbh
ATP-dependent Clp protease ATP-binding subunit clpA {ECO:0000313|EMBL:EIG53419.1}; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
clpA; ATP-dependent Clp protease ATP-binding subunit ClpA rbh
S5_scaffold_137_curated_15
Desulfonatronospira thiodismutans, Desulfonatronospira, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18658..18987)
DNA (330bp) protein (110aa)
ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q0W2_9DELT
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=555779 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfonatronospira.;" source="Desulfonatronospira thiodismutans ASO3-1.;"
ATP-dependent Clp protease adaptor protein ClpS
S5_scaffold_137_curated_16
CG_Desulfovib_01, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19054..19731
DNA (678bp) protein (226aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3Z2J4_DESAF
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
Tax=CG_Desulfovib_01
S5_scaffold_137_curated_17
Desulfovibrio alaskensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19857..20585
DNA (729bp) protein (243aa)
UPF0173 metal-dependent hydrolase Dde_0151 n=1 Tax=Desulfovibrio desulfuricans (strain G20) RepID=Y151_DESDG
beta-lactamase domain-containing protein
UPF0173 metal-dependent hydrolase Dde_0151 {ECO:0000255|HAMAP-Rule:MF_00457}; TaxID=207559 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alaskensis (strain G20) (Desulfovibrio desulfuricans; (strain G20)).;"
S5_scaffold_137_curated_18
unknown

Not on your lists

comp(20646..20834)
DNA (189bp) protein (63aa)

This feature has no annotations

S5_scaffold_137_curated_19
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21043..21729)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XSA4_DESMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH75626.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
S5_scaffold_137_curated_20
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21785..23614)
DNA (1830bp) protein (610aa)
UvrABC system protein C n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3Z3A0_DESAF rbh
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
UvrABC system protein C rbh
S5_scaffold_137_curated_21
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23731..24186
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JYQ9_DESFR
Uncharacterized protein {ECO:0000313|EMBL:EFL50479.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
hypothetical protein
S5_scaffold_137_curated_22
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24186..24686
DNA (501bp) protein (167aa)
Histidine triad (HIT) protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q5T2_9DELT
Histidine triad (HIT) protein {ECO:0000313|EMBL:EHJ46869.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
HIT family protein
S5_scaffold_137_curated_23
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24701..25072
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X2I2_DESRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV68629.1}; Flags: Precursor;; TaxID=485915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfohalobium.;" source="Desulfohalobium retbaense (strain DSM 5692).;"
S5_scaffold_137_curated_24
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25336..28032
DNA (2697bp) protein (899aa)
DNA mismatch repair protein MutS n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JYR2_DESFR rbh
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
mutS; DNA mismatch repair protein MutS rbh
S5_scaffold_137_curated_25
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28036..29283
DNA (1248bp) protein (416aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
Diaminopimelate decarboxylase n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q1M4_9DELT rbh
lysA; diaminopimelate decarboxylase rbh
S5_scaffold_137_curated_26
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29376..30674)
DNA (1299bp) protein (433aa)
Major facilitator superfamily protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XP15_DESMR rbh
major facilitator superfamily protein rbh
Major facilitator superfamily protein {ECO:0000313|EMBL:BAH77516.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
S5_scaffold_137_curated_27
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30817..32121
DNA (1305bp) protein (435aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
Histidinol dehydrogenase n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q3T5_9DELT rbh
histidinol dehydrogenase rbh
S5_scaffold_137_curated_28
GWA2_Desulfovibrionales_65_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32143..33039
DNA (897bp) protein (299aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6) rbh
phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Desulfovibrio longus RepID=UPI0003B5AA24 rbh
Tax=GWA2_Desulfovibrionales_65_9_curated
S5_scaffold_137_curated_29
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33195..35252
DNA (2058bp) protein (686aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JSL0_DESFR rbh
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:EFL52493.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
acyl-CoA dehydrogenase rbh
S5_scaffold_137_curated_30
CG_Desulfovib_01, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35472..37328
DNA (1857bp) protein (619aa)
Electron-transferring-flavoprotein dehydrogenase n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QB01_9DELT rbh
iron-sulfur binding protein rbh
Tax=CG_Desulfovib_01
Displaying items 1-30 of 109 in total

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