ggKbase home page

S5_scaffold_224_curated_25

Organism: S5_RifleAc_Desulfovibrio_putealis_63_18_curated

near complete RP 52 / 55 BSCG 51 / 51 ASCG 11 / 38
Location: 18859..19431

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XM95_DESMR similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 187.0
  • Bit_score: 204
  • Evalue 8.40e-50
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 187.0
  • Bit_score: 204
  • Evalue 2.40e-50
Tax=BJP_IG2102_Desulfovibrionales_64_25 similarity UNIPROT
DB: UniProtKB
  • Identity: 62.8
  • Coverage: 180.0
  • Bit_score: 236
  • Evalue 2.10e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

BJP_IG2102_Desulfovibrionales_64_25 → Desulfovibrio → Desulfovibrionales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGCGGCATCAGCTGGAAACGAACTGGCTTGAACATAGGGAGGAACTCAAAGCCTTCATCCTGCGGCGGGTAAAATCTCCCGCCGAGGCTGAGGACATCCTCCAGGACGTCTTTCTCAAGATGCTCTCCAGCCTGAACGCCCGTACCCGCATAGCGCACCCACGCGCATGGCTGTTCGCGATCTCACGCAACGCCGTGGTTGATTATTTTCGAAGCAAACGCCCAATGGAGATGATCCCTGAAGATTTGGCTGGCCACTGTCCTGACCCGGACAGTGGCCCCATCAGGGAAATCGGGAACTGCCTGACGCCGATGGTGAATTCCCTCCCATCGAAGCTTCGCGAGGCGCTGGTCCTGGCGGACCTGGAAGGGATGAAGCAGCAGCAGGTGGCGGATACGCTTGGAATAACCCTGGCAGCCGTCAAATCCCGAATCCTGAGGGGACGTAGCCAGATGCGGCGCATGATCGAGGACTGCTGCCATCTGGAGCTGGACTCCCGAGGGAGTATTATGGAGTACGTCCCCAAAGGGAACTGCTGCTTGTCTGACAGCGCGGGTTATTTCCGGACGTGA
PROTEIN sequence
Length: 191
MRHQLETNWLEHREELKAFILRRVKSPAEAEDILQDVFLKMLSSLNARTRIAHPRAWLFAISRNAVVDYFRSKRPMEMIPEDLAGHCPDPDSGPIREIGNCLTPMVNSLPSKLREALVLADLEGMKQQQVADTLGITLAAVKSRILRGRSQMRRMIEDCCHLELDSRGSIMEYVPKGNCCLSDSAGYFRT*