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S5_scaffold_224_curated

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_224_curated_1
unknown

Not on your lists

comp(3..62)
DNA (60bp) protein (20aa)

This feature has no annotations

S5_scaffold_224_curated_2
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75..251)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7TB82_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPR34412.1}; TaxID=1121439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alkalitolerans DSM 16529.;"
hypothetical protein
S5_scaffold_224_curated_3
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(270..596)
DNA (327bp) protein (109aa)
Transcriptional regulator, ArsR family n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LXF4_DESBD
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ACU90025.1}; TaxID=525897 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiaceae; Desulfomicrobium.;" source="Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378); (Desulfovibrio baculatus).;"
S5_scaffold_224_curated_4
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

970..1287
DNA (318bp) protein (106aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DL76_DESVM
Fis family transcriptional regulator
Tax=BJP_08E140C01_Desulfomicrobium_58_14
S5_scaffold_224_curated_5
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1351..2544)
DNA (1194bp) protein (398aa)
Chromate transporter, chromate ion transporter (CHR) family n=1 Tax=Desulfovibrio desulfuricans ND132 RepID=F0JGY5_DESDE rbh
chromate ion transporter family chromate transporter rbh
Chromate transporter, chromate ion transporter (CHR) family {ECO:0000313|EMBL:EGB15175.1}; TaxID=641491 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio desulfuricans ND132.;"
S5_scaffold_224_curated_6
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2531..2929)
DNA (399bp) protein (133aa)
Predicted transcriptional regulator n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D4T9_PELTS
ArsR; transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:BAF58726.1}; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI).;"
S5_scaffold_224_curated_7
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3143..3511
DNA (369bp) protein (123aa)
Transcriptional regulator, ArsR family n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RI65_DESPD
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ADW17412.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
S5_scaffold_224_curated_8
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3550..4647
DNA (1098bp) protein (366aa)
Putative permease n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q6Y0_9DELT rbh
Putative permease {ECO:0000313|EMBL:EIG55536.1}; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
hypothetical protein rbh
S5_scaffold_224_curated_9
BJP_IG2102_Desulfovibrionales_64_25, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4787..5020
DNA (234bp) protein (78aa)
Small redox-active disulfide protein 2 n=1 Tax=Desulfovibrio africanus PCS RepID=M5PRP0_DESAF
redox-active disulfide protein 2
Tax=BJP_IG2102_Desulfovibrionales_64_25
S5_scaffold_224_curated_10
BJP_IG2102_Desulfovibrionales_64_25, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5049..5426
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI00037BA6AE
hypothetical protein
Tax=BJP_IG2102_Desulfovibrionales_64_25
S5_scaffold_224_curated_11

Not on your lists

5469..5969
DNA (501bp) protein (167aa)
Rhodanese domain protein n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZYG1_DESOH
Marine sediment metagenome DNA, contig: S06H3_S15252 {ECO:0000313|EMBL:GAI34065.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rhodanese domain-containing protein
S5_scaffold_224_curated_12
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6073..6606)
DNA (534bp) protein (178aa)
Putative zinc resistance-associated protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XM91_DESMR
Zinc resistance-associated protein {ECO:0000313|EMBL:KHK00413.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
zinc resistance-associated protein precursor
S5_scaffold_224_curated_13
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6782..7408
DNA (627bp) protein (209aa)
TPR repeat-containing protein n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LXB7_DESBD
hypothetical protein
Tax=BJP_08E140C01_Desulfomicrobium_58_14
S5_scaffold_224_curated_14
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8056..8277
DNA (222bp) protein (74aa)
Thioredoxin domain-containing protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q5G1_9DELT
Thioredoxin domain-containing protein {ECO:0000313|EMBL:EHJ48962.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
thioredoxin domain-containing protein
S5_scaffold_224_curated_15
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8293..9000
DNA (708bp) protein (236aa)
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q5G2_9DELT rbh
Cytochrome c biogenesis protein transmembrane region {ECO:0000313|EMBL:EHJ48963.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
thiol:disulfide interchange protein
S5_scaffold_224_curated_16
unknown

Not on your lists

9328..9534
DNA (207bp) protein (69aa)

This feature has no annotations

S5_scaffold_224_curated_17
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9722..12925
DNA (3204bp) protein (1068aa)
Cation/multidrug efflux pump n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q6X5_9DELT rbh
Cation/multidrug efflux pump {ECO:0000313|EMBL:EIG55531.1}; Flags: Precursor;; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
cation/multidrug efflux pump rbh
S5_scaffold_224_curated_18
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12935..14140
DNA (1206bp) protein (402aa)
RND family efflux transporter, MFP subunit n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q6X4_9DELT rbh
Putative Co/Zn/Cd efflux system membrane fusion protein {ECO:0000313|EMBL:KHK00303.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
RND family efflux transporter, MFP subunit rbh
S5_scaffold_224_curated_19
unknown

Not on your lists

14205..14918
DNA (714bp) protein (238aa)

This feature has no annotations

S5_scaffold_224_curated_20
BJP_IG2102_Desulfovibrionales_64_25, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15063..15524
DNA (462bp) protein (154aa)
Rhodanese-like id=3843481 bin=GWC2_Pelobacter_58_13 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
rhodanese
Tax=BJP_IG2102_Desulfovibrionales_64_25
S5_scaffold_224_curated_21
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15772..16869
DNA (1098bp) protein (366aa)
Arsenical-resistance protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q5F6_9DELT rbh
Arsenical-resistance protein {ECO:0000313|EMBL:EHJ48957.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
arsB; arsenical-resistance protein ACR3 rbh
S5_scaffold_224_curated_22
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16930..17406
DNA (477bp) protein (159aa)
Protein-tyrosine phosphatase, low molecular weight n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1K227_DESFR
Protein-tyrosine phosphatase, low molecular weight {ECO:0000313|EMBL:EFL49340.1}; Flags: Precursor;; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
protein-tyrosine phosphatase
S5_scaffold_224_curated_23
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17409..17828
DNA (420bp) protein (140aa)
Protein tyrosine phosphatase n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3YWK3_DESAF
protein tyrosine phosphatase
Protein tyrosine phosphatase {ECO:0000313|EMBL:EGJ50496.1}; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus str. Walvis Bay.;"
S5_scaffold_224_curated_24
BJP_IG2102_Desulfovibrionales_64_25, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18054..18848
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XM92_DESMR rbh
hypothetical protein rbh
Tax=BJP_IG2102_Desulfovibrionales_64_25
S5_scaffold_224_curated_25
BJP_IG2102_Desulfovibrionales_64_25, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18859..19431
DNA (573bp) protein (191aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XM95_DESMR
RNA polymerase ECF-type sigma factor
Tax=BJP_IG2102_Desulfovibrionales_64_25
S5_scaffold_224_curated_26
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19466..20560)
DNA (1095bp) protein (365aa)
Radical SAM domain protein n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7UQF1_9DELT rbh
Radical SAM domain protein {ECO:0000313|EMBL:EPR36259.1}; TaxID=1121439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alkalitolerans DSM 16529.;"
radical SAM protein
S5_scaffold_224_curated_27
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20716..21060
DNA (345bp) protein (115aa)
Transcriptional regulator, ArsR family id=3843489 bin=GWC2_Pelobacter_58_13 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
ArsR family transcriptional regulator
Tax=GWC2_Pelobacteraceae_58_13_curated
S5_scaffold_224_curated_28
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21083..21832
DNA (750bp) protein (250aa)
Molybdopterin oxidoreductase iron-sulfur binding subunit n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XM99_DESMR rbh
molybdopterin oxidoreductase iron-sulfur binding subunit rbh
Molybdopterin oxidoreductase iron-sulfur binding subunit {ECO:0000313|EMBL:BAH77227.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
S5_scaffold_224_curated_29
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21843..22976
DNA (1134bp) protein (378aa)
Polysulphide reductase NrfD family protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XM98_DESMR rbh
polysulfide reductase NrfD family protein rbh
Polysulphide reductase NrfD family protein {ECO:0000313|EMBL:BAH77226.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
S5_scaffold_224_curated_30
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22989..26135
DNA (3147bp) protein (1049aa)
Molybdopterin oxidoreductase molybdopterin binding subunit n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XM97_DESMR rbh
Tetrathionate reductase subunit A {ECO:0000313|EMBL:KHK00390.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
molybdopterin oxidoreductase molybdopterin binding subunit rbh
Displaying items 1-30 of 84 in total

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