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S5_scaffold_1032_curated

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_1032_curated_1
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(2..607)
DNA (606bp) protein (202aa)
galactokinase (EC:2.7.1.6)
Galactokinase {ECO:0000313|EMBL:ADY12220.1}; EC=2.7.1.6 {ECO:0000313|EMBL:ADY12220.1};; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
Galactokinase n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RXU3_SPHGB
S5_scaffold_1032_curated_2
Zhouia amylolytica, Zhouia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(642..1490)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Eudoraea adriatica RepID=UPI000369BB83 rbh
Polysaccharide deacetylase {ECO:0000313|EMBL:ETN95787.1}; TaxID=1286632 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zhouia.;" source="Zhouia amylolytica AD3.;"
polysaccharide deacetylase rbh
S5_scaffold_1032_curated_3

Not on your lists

comp(1492..2577)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y4V6_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD32397.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
S5_scaffold_1032_curated_4
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(2580..3260)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YII1_9BACT
acetoacetyl-CoA reductase pro
Tax=BJP_IG2069_Bacteroidetes_43_11
S5_scaffold_1032_curated_5
Candidatus Cloacimonas acidaminovorans, Candidatus Cloacimonas, Cloacimonetes, Bacteria

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comp(3274..4266)
DNA (993bp) protein (331aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=459349 species="Bacteria; Cloacimonetes; Candidatus Cloacimonas.;" source="Cloacamonas acidaminovorans (strain Evry).;"
3-oxoacyl-ACP synthase (EC:2.3.1.41) rbh
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Cloacamonas acidaminovorans (strain Evry) RepID=B0VGW4_CLOAI rbh
S5_scaffold_1032_curated_6
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(4273..5376)
DNA (1104bp) protein (368aa)
Glycosyltransferase, GT4 family {ECO:0000313|EMBL:KGL60303.1}; EC=2.4.1.- {ECO:0000313|EMBL:KGL60303.1};; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_33_49.;"
a-glycosyltransferase n=1 Tax=Thermophagus xiamenensis RepID=UPI000255DC48 rbh
rgpA; a-glycosyltransferase rbh
S5_scaffold_1032_curated_7
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(5376..6278)
DNA (903bp) protein (301aa)
dtdp-4-dehydrorhamnose reductase id=3343936 bin=GWF2_Bacteroidetes_42_66 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73 rbh
dtdp-4-dehydrorhamnose reductase rbh
Tax=GWE2_Bacteroidetes_42_39_curated
S5_scaffold_1032_curated_8
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(6271..7227)
DNA (957bp) protein (319aa)
Glycosyltransferase, putative n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZI86_9BACT
Glycosyltransferase, putative {ECO:0000313|EMBL:EAY29754.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
group 1 glycosyl transferase
S5_scaffold_1032_curated_9
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7242..8150)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=S2KS73_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPC05289.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
glycosyltransferase rbh
S5_scaffold_1032_curated_10
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8378..9493)
DNA (1116bp) protein (372aa)
glycosyltransferase (EC:2.4.1.-)
Glycosyltransferase, family GT4 {ECO:0000313|EMBL:CAZ96058.1}; EC=2.4.1.- {ECO:0000313|EMBL:CAZ96058.1};; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;"
Glycosyltransferase, family GT4 n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L598_ZOBGA
S5_scaffold_1032_curated_11
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9509..10717)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TG76_9BACE rbh
Uncharacterized protein {ECO:0000313|EMBL:EEY82130.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
lipopolysaccharide biosynthesis protein
S5_scaffold_1032_curated_12
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10674..11915)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:1058 RepID=R5CK41_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KEO71832.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
group 1 glycosyl transferase
S5_scaffold_1032_curated_13
Bacteroides sp. CAG:530, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12352..13572)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:530 RepID=R6CEX1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA75223.1}; TaxID=1262741 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:530.;"
hypothetical protein
S5_scaffold_1032_curated_14
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13569..14648)
DNA (1080bp) protein (360aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus 3_8_47FAA RepID=F7L927_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGM95367.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
family 2 glycosyl transferase
S5_scaffold_1032_curated_15
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14648..16060)
DNA (1413bp) protein (471aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus 3_8_47FAA RepID=F7L928_BACOV rbh
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:KIA93826.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein rbh
S5_scaffold_1032_curated_16
Sulfurospirillum sp. SCADC, Sulfurospirillum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16065..16955)
DNA (891bp) protein (297aa)
Putative uncharacterized protein n=1 Tax=Odoribacter laneus YIT 12061 RepID=H1DGP0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KFL34031.1}; TaxID=1537915 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Sulfurospirillum.;" source="Sulfurospirillum sp. SCADC.;"
NAD-dependent epimerase/dehydratase
S5_scaffold_1032_curated_17
GWF2_Sulfurimonas_37_8_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16957..17493)
DNA (537bp) protein (179aa)
dTDP-4-dehydrorhamnose 3 5-epimerase n=1 Tax=Prevotella sp. CAG:1320 RepID=R6E2H4_9BACT
dTDP-4-dehydrorhamnose 3,5-epimerase
Tax=GWF2_Sulfurimonas_37_8_curated
S5_scaffold_1032_curated_18
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(17497..18174)
DNA (678bp) protein (226aa)
putative ferredoxin-NAD(+) reductase (EC:1.18.1.3)
Putative Nitric oxide dioxygenase id=1917893 bin=GWD2_Bacteroidetes_40_43 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Tax=GWB2_Bacteroidetes_41_8_curated
S5_scaffold_1032_curated_19
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(18199..19518)
DNA (1320bp) protein (440aa)
RfbH id=1917890 bin=GWD2_Bacteroidetes_40_43 species=Spirochaeta aurantia genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63 rbh
DegT/DnrJ/EryC1/StrS aminotransferase rbh
Tax=GWE2_Bacteroidetes_40_63_curated
S5_scaffold_1032_curated_20
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19533..20633)
DNA (1101bp) protein (367aa)
CDP-glucose 4,6-dehydratase id=4841193 bin=GWC2_Bacteroidetes_40_13 species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes rbh
CDP-glucose 4,6-dehydratase rbh
Tax=GWB2_Bacteroidetes_41_8_curated
S5_scaffold_1032_curated_21
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20627..21400)
DNA (774bp) protein (258aa)
rfbF; glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33)
Glucose-1-phosphate cytidylyltransferase id=2022993 bin=GWE2_Bacteroidetes_40_63 species=Thiovulum sp. ES genus=Thiovulum taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good rbh
Tax=GWE2_Bacteroidetes_40_63_curated
S5_scaffold_1032_curated_22
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(21434..22027)
DNA (594bp) protein (198aa)
Capsular exopolysaccharide family n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1G6_PALPW
capsular exopolysaccharide family protein
Capsular exopolysaccharide family {ECO:0000313|EMBL:ADQ78560.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Displaying 22 items

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