ggKbase home page

S5_scaffold_662_curated

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_662_curated_1
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3..1241
DNA (1239bp) protein (413aa)
enolase (EC:4.2.1.11) rbh
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Enolase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3A2_PALPW rbh
S5_scaffold_662_curated_2
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1704..2561
DNA (858bp) protein (286aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1M7_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78621.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
S5_scaffold_662_curated_3
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2627..3397)
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T188_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78469.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
S5_scaffold_662_curated_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3931..4812
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GBL6_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC90046.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
S5_scaffold_662_curated_5
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4983..6311
DNA (1329bp) protein (443aa)
SEC-C motif domain-containing protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2QY97_METFO
Uncharacterized protein {ECO:0000313|EMBL:EZH73664.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
hypothetical protein
S5_scaffold_662_curated_6

Not on your lists

6322..7041
DNA (720bp) protein (240aa)
hypothetical protein, partial n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B4427B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKD51905.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
S5_scaffold_662_curated_7
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7280..7912
DNA (633bp) protein (211aa)
Putative uncharacterized protein id=4334939 bin=GWF2_Bacteroidetes_42_66 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
S5_scaffold_662_curated_8
GWC2_Elusimicrobia_64_44_curated, Elusimicrobia, Bacteria

Not on your lists

7920..8885
DNA (966bp) protein (322aa)
Uncharacterized protein id=4746822 bin=GWC2_Elusimicrobia_64_44 species=Bacteroides salyersiae genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good rbh
hypothetical protein
Tax=GWC2_Elusimicrobia_64_44_curated
S5_scaffold_662_curated_9
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8925..9677
DNA (753bp) protein (251aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO29318.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
Putative uncharacterized protein id=4348375 bin=GWF2_Bacteroidetes_42_66 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein
S5_scaffold_662_curated_10
unknown

Not on your lists

9945..10424
DNA (480bp) protein (160aa)

This feature has no annotations

S5_scaffold_662_curated_11
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10495..12219
DNA (1725bp) protein (575aa)
Beta-lactamase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VWP2_DYAFD
Uncharacterized protein {ECO:0000313|EMBL:KJF42153.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
beta-lactamase
S5_scaffold_662_curated_12
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12403..13383
DNA (981bp) protein (327aa)
Death-on-curing family protein n=1 Tax=Denitrovibrio acetiphilus (strain DSM 12809 / N2460) RepID=D4H6A2_DENA2 rbh
death-on-curing family protein rbh
Tax=CG_Paludi_01
S5_scaffold_662_curated_13
unknown

Not on your lists

13385..13615
DNA (231bp) protein (77aa)

This feature has no annotations

S5_scaffold_662_curated_14
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13686..15170
DNA (1485bp) protein (495aa)
Penicillin-binding protein, beta-lactamase class C n=1 Tax=Joostella marina DSM 19592 RepID=I3C9Y2_9FLAO rbh
beta-lactamase rbh
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
S5_scaffold_662_curated_15
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15256..16347
DNA (1092bp) protein (364aa)
Uncharacterized protein n=2 Tax=Methanosarcina mazei RepID=M1PDC6_METMZ
Uncharacterized protein {ECO:0000313|EMBL:KKF99079.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina frisia).;"
hypothetical protein
S5_scaffold_662_curated_16
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16393..17478
DNA (1086bp) protein (362aa)
Uncharacterized protein n=2 Tax=Methanosarcina mazei RepID=M1PDC6_METMZ
Uncharacterized protein {ECO:0000313|EMBL:KKH91402.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina frisia).;"
hypothetical protein
S5_scaffold_662_curated_17
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

17489..18181
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037E291A
lipoprotein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
S5_scaffold_662_curated_18
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18390..19379
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0003621647
Uncharacterized protein {ECO:0000313|EMBL:KIA90838.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
MAC/perforin domain-containing protein
S5_scaffold_662_curated_19
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19405..19968
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11VQ3_CYTH3
Uncharacterized protein {ECO:0000313|EMBL:EZH76010.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
hypothetical protein
S5_scaffold_662_curated_20
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20061..21191
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TTA4_MARTH rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADR21934.1}; Flags: Precursor;; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
S5_scaffold_662_curated_21
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21248..21559
DNA (312bp) protein (104aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO29318.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
Putative uncharacterized protein id=4348375 bin=GWF2_Bacteroidetes_42_66 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
Displaying 21 items

View Taxonomy