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S5_scaffold_559_curated

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_559_curated_1
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

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3..536
DNA (534bp) protein (178aa)
Polysaccharide export outer membrane protein id=3650439 bin=GWF2_Bacteroidetes_33_16 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good rbh
hypothetical protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
S5_scaffold_559_curated_2
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

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543..2924
DNA (2382bp) protein (794aa)
Capsular exopolysaccharide family id=3759927 bin=GWF2_Bacteroidetes_33_38 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699 rbh
hypothetical protein rbh
Tax=BJP_08E140C01_Bacteroidetes_41_49
S5_scaffold_559_curated_3

Not on your lists

3360..4523
DNA (1164bp) protein (388aa)
GDP-mannose 4,6-dehydratase (EC:4.2.1.47) rbh
GDP-mannose 4,6-dehydratase n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6X6E1_CELAD rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN34186.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S5_scaffold_559_curated_4
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

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4516..5445
DNA (930bp) protein (310aa)
NAD-dependent epimerase/dehydratase id=4524200 bin=GWF2_Bacteroidetes_38_335 species=Sulfurimonas autotrophica genus=Sulfurimonas taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11 rbh
nodulation protein NolK
Tax=GWF2_Bacteroidetes_38_335_curated
S5_scaffold_559_curated_5
Chlorobium phaeobacteroides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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5447..6622
DNA (1176bp) protein (392aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Chlorobium phaeobacteroides (strain BS1) RepID=B3EM03_CHLPB rbh
DegT/DnrJ/EryC1/StrS aminotransferase rbh
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:ACE04844.1}; TaxID=331678 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium phaeobacteroides (strain BS1).;"
S5_scaffold_559_curated_6

Not on your lists

6988..7392
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y5F8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD32426.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
S5_scaffold_559_curated_7
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

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7382..7798
DNA (417bp) protein (139aa)
WxcM-like domain-containing protein id=3759933 bin=GWF2_Bacteroidetes_33_38 species=Gillisia limnaea genus=Gillisia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
WxcM-like domain-containing protein
Tax=GWF2_Bacteroidetes_33_38_curated
S5_scaffold_559_curated_8
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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7795..8622
DNA (828bp) protein (276aa)
Putative Citrate lyase subunit beta n=1 Tax=Clostridium ultunense Esp RepID=M1YX68_9CLOT
citE; citryl-CoA lyase subunit beta-like protein
Tax=GWF2_Bacteroidetes_35_48_curated
S5_scaffold_559_curated_9
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8609..9076
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H6K7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB92966.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
dehydratase
S5_scaffold_559_curated_10
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

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9069..9965
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=unclassified Cloacimonetes RepID=UPI0003637946 rbh
citrate lyase subunit beta
Tax=BJP_IG2102_Bacteroidetes_40_9
S5_scaffold_559_curated_11
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9958..10623
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=2 Tax=Alistipes indistinctus YIT 12060 RepID=G5H6K3_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EHB93014.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
S5_scaffold_559_curated_12

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10626..11750
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YIK3_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD32423.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
4-keto.6-deoxy-N-acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase rbh
S5_scaffold_559_curated_13
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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11747..12724
DNA (978bp) protein (326aa)
Cell wall biogenesis glycosyltransferase-like protein n=1 Tax=Flavobacterium sp. F52 RepID=J1KVF4_9FLAO
Cell wall biogenesis glycosyltransferase-like protein {ECO:0000313|EMBL:AHM61782.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
S5_scaffold_559_curated_14
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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12729..14201
DNA (1473bp) protein (491aa)
Flippase {ECO:0000313|EMBL:AHM61783.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
Uncharacterized protein id=3559561 bin=GWF2_Bacteroidetes_40_14 species=Bacteroides fragilis genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes rbh
putative flippase rbh
S5_scaffold_559_curated_15
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

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14324..15202
DNA (879bp) protein (293aa)
glycosyltransferase family protein (EC:2.4.-.-)
Glycosyltransferase, group 2 family n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BYK1_PSEFL
Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
S5_scaffold_559_curated_16
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

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15280..16287
DNA (1008bp) protein (336aa)
UDP-N-acetylglucosamine 4,6-dehydratase id=3126176 bin=GWF2_Bacteroidetes_41_31 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
UDP-N-acetylglucosamine 4,6-dehydratase rbh
Tax=GWF2_Bacteroidetes_41_31_curated
S5_scaffold_559_curated_17
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16284..17027
DNA (744bp) protein (248aa)
Cytidylyltransferase n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PUR5_9BACE
Cytidylyltransferase {ECO:0000313|EMBL:EGF56008.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
acylneuraminate cytidylyltransferase
S5_scaffold_559_curated_18
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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17024..18196
DNA (1173bp) protein (391aa)
Spore coat polysaccharide biosynthesis protein SpsC family protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PUR4_9BACE rbh
Spore coat protein {ECO:0000313|EMBL:EZH72284.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
Pleiotropic regulatory protein degT rbh
S5_scaffold_559_curated_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18213..19274
DNA (1062bp) protein (354aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9JVZ2_BACFG rbh
NeuB family protein {ECO:0000313|EMBL:EXZ42895.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
putative N-acetylneuraminate synthase rbh
S5_scaffold_559_curated_20
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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19278..19862
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PUR2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGF56005.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
S5_scaffold_559_curated_21
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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19880..20479
DNA (600bp) protein (200aa)
Conserved domain protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PUR1_9BACE
Conserved domain protein {ECO:0000313|EMBL:EGF56004.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
S5_scaffold_559_curated_22
unknown

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20764..21690
DNA (927bp) protein (309aa)

This feature has no annotations

S5_scaffold_559_curated_23
unknown

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comp(21645..21767)
DNA (123bp) protein (41aa)

This feature has no annotations

S5_scaffold_559_curated_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21899..23101
DNA (1203bp) protein (401aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=V6G474_ECOLX
Putative O-antigen polymerase {ECO:0000313|EMBL:AAK60458.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
two-component response regulator
S5_scaffold_559_curated_25
Chlorobium phaeobacteroides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

23098..23952
DNA (855bp) protein (285aa)
Glycosyl transferase family 11 n=1 Tax=Chlorobium phaeobacteroides (strain BS1) RepID=B3ELZ7_CHLPB
glycosyl transferase family protein
Glycosyl transferase family 11 {ECO:0000313|EMBL:ACE04838.1}; TaxID=331678 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium phaeobacteroides (strain BS1).;"
S5_scaffold_559_curated_26
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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23982..25010
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Odoribacter sp. CAG:788 RepID=R5P4B4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCZ10933.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
hypothetical protein
S5_scaffold_559_curated_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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25073..26338
DNA (1266bp) protein (422aa)
Uncharacterized protein id=1987324 bin=GWD2_RBX1-related_39_127 species=Idiomarina xiamenensis genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17 rbh
putative glycosyltransferase rbh
Tax=GWF2_RBX1_38_17_curated
S5_scaffold_559_curated_28
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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26338..27132
DNA (795bp) protein (265aa)
Glycosyl transferase family 2 n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TQB2_MARTH
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADR22635.1}; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
S5_scaffold_559_curated_29
unknown

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comp(27143..27280)
DNA (138bp) protein (46aa)

This feature has no annotations

Displaying 29 items

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