ggKbase home page

S5_scaffold_94_curated

Search features with annotation key words

Displaying items 1-30 of 154 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_94_curated_1
unknown

Not on your lists

2..82
DNA (81bp) protein (27aa)

This feature has no annotations

S5_scaffold_94_curated_2
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

91..792
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037E40FB rbh
Putative transmembrane abc transporter protein {ECO:0000313|EMBL:CDK01970.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
major intrinsic protein
S5_scaffold_94_curated_3
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(789..1133)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L3B8_9MICO
Bile acid:sodium symporter (Modular protein) {ECO:0000313|EMBL:CDK01969.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Bile acid:sodium symporter
S5_scaffold_94_curated_4
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1803..2489
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L799_9MICO
Response regulator {ECO:0000313|EMBL:KDA04999.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain-containing protein
S5_scaffold_94_curated_5
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2486..3487
DNA (1002bp) protein (334aa)
Signal-transduction histidine kinase senX3 {ECO:0000313|EMBL:KJL34697.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KJL34697.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A716_9MICO rbh
signal transduction histidine kinase
S5_scaffold_94_curated_6
Propionibacterium acidipropionici, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3474..4313)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000361274A rbh
membrane-associated lipoprotein
Membrane-associated lipoprotein {ECO:0000313|EMBL:AFV90912.1}; TaxID=1171373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM; 6432 / NBRC 12425 / NCIMB 8070).;"
S5_scaffold_94_curated_7
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4310..4759)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C6C4C
FMN-binding protein {ECO:0000313|EMBL:EYT59606.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
hypothetical protein
S5_scaffold_94_curated_8
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4776..6236)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L958_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM87095.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
ferric reductase rbh
S5_scaffold_94_curated_9
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6356..7243
DNA (888bp) protein (296aa)
phosphotyrosine protein phosphatase n=1 Tax=Agromyces italicus RepID=UPI0003B3232B rbh
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CDK01978.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
ArsR family transcriptional regulator
S5_scaffold_94_curated_10
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7312..8289
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002EA5581 rbh
Protein SphX {ECO:0000313|EMBL:CDK01979.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
pstS; phosphate transport system substrate-binding protein rbh
S5_scaffold_94_curated_11
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8301..9683
DNA (1383bp) protein (461aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002FDCBB3 rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CDK01980.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
pyridine nucleotide-disulfide oxidoreductase rbh
S5_scaffold_94_curated_12
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9680..10102
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002DB37D9
Arsenate reductase {ECO:0000313|EMBL:CDK01981.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
protein tyrosine phosphatase
S5_scaffold_94_curated_trna_5
unknown

Not on your lists

comp(10141..10225)
DNA (85bp)
transferRNA Ser
S5_scaffold_94_curated_13
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10253..12535)
DNA (2283bp) protein (761aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000364DEC3 rbh
Putative Transglutaminase-like enzyme, cysteine protease {ECO:0000313|EMBL:CDK01982.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
transglutaminase-like enzyme, cysteine protease rbh
S5_scaffold_94_curated_14
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12522..13802)
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002EC9672 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDK01983.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein rbh
S5_scaffold_94_curated_15
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13799..14872)
DNA (1074bp) protein (358aa)
ATPase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003747051 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDK01984.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
MoxR-like ATPase rbh
S5_scaffold_94_curated_16
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15167..17296
DNA (2130bp) protein (710aa)
Phosphate acetyltransferase {ECO:0000313|EMBL:CDK01985.1}; EC=2.3.1.8 {ECO:0000313|EMBL:CDK01985.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
phosphate acetyltransferase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000375BAA9 rbh
phosphotransacetylase rbh
S5_scaffold_94_curated_17
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17293..18570
DNA (1278bp) protein (426aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
acetate kinase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034CBFFC rbh
ackA; acetate kinase rbh
S5_scaffold_94_curated_18
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18682..19410
DNA (729bp) protein (243aa)
haloacid dehalogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037951AE rbh
phosphatase/phosphohexomutase rbh
Predicted phosphatase/phosphohexomutase {ECO:0000313|EMBL:BAJ75590.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
S5_scaffold_94_curated_19
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19467..22022
DNA (2556bp) protein (852aa)
kojibiose phosphorylase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037A2DDD rbh
Glycoside hydrolase family 65 central catalytic {ECO:0000313|EMBL:CDK00114.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
trehalose and maltose hydrolase rbh
S5_scaffold_94_curated_20
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22246..24420
DNA (2175bp) protein (725aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7) rbh
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI00036FF045 rbh
DNA polymerase III, subunits gamma and tau {ECO:0000313|EMBL:CDK01658.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
S5_scaffold_94_curated_21
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24420..25013
DNA (594bp) protein (198aa)
recombinase RecR n=1 Tax=Microbacterium sp. B19 RepID=UPI0003478A08 rbh
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
recR; recombinational DNA repair protein rbh
S5_scaffold_94_curated_22
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25035..25526)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D297A5
Uncharacterized protein {ECO:0000313|EMBL:CDK01660.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
S5_scaffold_94_curated_23
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25577..26905
DNA (1329bp) protein (443aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Aspartokinase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N7Y8_MICTS rbh
lysC; aspartokinase rbh
S5_scaffold_94_curated_24
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26952..28022
DNA (1071bp) protein (357aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
aspartate-semialdehyde dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI000347B783 rbh
asd; aspartate-semialdehyde dehydrogenase rbh
S5_scaffold_94_curated_25
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28128..29606
DNA (1479bp) protein (493aa)
Probable malate:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00212}; EC=1.1.5.4 {ECO:0000256|HAMAP-Rule:MF_00212};; MQO {ECO:0000256|HAMAP-Rule:MF_00212}; Malate dehydrogenase [quinone] {ECO:0000256|HAMAP-Rule:MF_00212}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Probable malate:quinone oxidoreductase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A937_9MICO rbh
mqoA; dehydrogenase rbh
S5_scaffold_94_curated_26
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29637..30263
DNA (627bp) protein (209aa)
Thymidine kinase {ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|RuleBase:RU000544};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
thymidine kinase n=1 Tax=Microbacterium barkeri RepID=UPI0002EE0867 rbh
tdk; thymidine kinase
S5_scaffold_94_curated_27
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30304..31320
DNA (1017bp) protein (339aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CDK01665.1}; EC=5.1.3.2 {ECO:0000313|EMBL:CDK01665.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
UDP-glucose 4-epimerase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N7Z2_MICTS rbh
UDP-glucose 4-epimerase rbh
S5_scaffold_94_curated_28
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31347..32198)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000376E211 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDK01666.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein rbh
S5_scaffold_94_curated_29
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32256..33062)
DNA (807bp) protein (269aa)
Predicted hydrolase of the HAD superfamily n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N7Z5_MICTS rbh
Predicted hydrolase of the HAD superfamily {ECO:0000313|EMBL:CDK01667.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hydrolase of the HAD superfamily rbh
Displaying items 1-30 of 154 in total

View Taxonomy