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S5_scaffold_653_curated

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_653_curated_1
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..146)
DNA (144bp) protein (48aa)
Hydroxymethylbilane synthase {ECO:0000256|SAAS:SAAS00018413}; EC=2.5.1.61 {ECO:0000256|SAAS:SAAS00018413};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Porphobilinogen deaminase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7E2_9MICO
S5_scaffold_653_curated_2
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(157..879)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00036DF816 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDK01378.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein rbh
S5_scaffold_653_curated_3
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(925..1251)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Microbacterium RepID=UPI00036996E6
Uncharacterized protein {ECO:0000313|EMBL:CDK01377.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
S5_scaffold_653_curated_4
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1241..1666)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002E96490
Uncharacterized protein {ECO:0000313|EMBL:CDK01376.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
S5_scaffold_653_curated_5
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1669..2052)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037AD7FA
Uncharacterized protein {ECO:0000313|EMBL:CDK01375.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
S5_scaffold_653_curated_6
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2146..3696)
DNA (1551bp) protein (517aa)
Protoporphyrinogen oxidase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBZ3_MICTS rbh
Protoporphyrinogen oxidase {ECO:0000313|EMBL:CDK01374.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
protoporphyrinogen oxidase rbh
S5_scaffold_653_curated_7
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3693..6158)
DNA (2466bp) protein (822aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
uroporphyrinogen decarboxylase n=1 Tax=Microbacterium barkeri RepID=UPI00030AFF77 rbh
hemE; uroporphyrinogen-III decarboxylase rbh
S5_scaffold_653_curated_8
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6198..6506
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B99BB
Cobalamin biosynthesis protein CobN {ECO:0000313|EMBL:CDK01371.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
S5_scaffold_653_curated_9
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6694..7263
DNA (570bp) protein (190aa)
iron-sulfur cluster assembly protein HesB n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D9960 rbh
HhH-GPD family protein {ECO:0000313|EMBL:CDK01370.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
HhH-GPD family protein
S5_scaffold_653_curated_10
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7296..10133
DNA (2838bp) protein (946aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003758192 rbh
ATPase rbh
Predicted ATPase {ECO:0000313|EMBL:BAJ74809.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
S5_scaffold_653_curated_11
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10155..10973)
DNA (819bp) protein (273aa)
ABC transporter n=1 Tax=Microbacterium sp. B19 RepID=UPI000346CACF rbh
multidrug ABC transporter permease rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
S5_scaffold_653_curated_12
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10970..11992)
DNA (1023bp) protein (341aa)
IclR family transcriptional regulator n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003679BB7 rbh
multidrug ABC transporter ATPase rbh
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:BAJ74807.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
S5_scaffold_653_curated_13
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(12250..13635)
DNA (1386bp) protein (462aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Glycine--tRNA ligase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L682_9MICO rbh
glyS; glycyl-tRNA synthetase (class II) rbh
S5_scaffold_653_curated_14
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13830..15305
DNA (1476bp) protein (492aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B2D7E rbh
Uncharacterized protein {ECO:0000313|EMBL:CDK01368.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component rbh
S5_scaffold_653_curated_15
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15339..16220)
DNA (882bp) protein (294aa)
3-beta hydroxysteroid dehydrogenase n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B79828 rbh
NAD-dependent epimerase/dehydratase rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AGL18510.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
S5_scaffold_653_curated_16
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16304..16885
DNA (582bp) protein (194aa)
TetR family transcriptional regulator n=1 Tax=Streptomyces sp. e14 RepID=D6KGQ9_9ACTO
TetR family transcriptional regulator {ECO:0000313|EMBL:EXU65996.1}; TaxID=1158056 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
TetR-family transcriptional regulator
S5_scaffold_653_curated_17
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16919..17767)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000381C6C0
Uncharacterized protein {ECO:0000313|EMBL:CDK01367.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
S5_scaffold_653_curated_18
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17781..18566)
DNA (786bp) protein (262aa)
alpha/beta hydrolase n=1 Tax=Nocardia sp. BMG111209 RepID=UPI00036D8009
Hydrolase {ECO:0000313|EMBL:CDK01366.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
alpha/beta hydrolase
S5_scaffold_653_curated_19
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18630..19928
DNA (1299bp) protein (433aa)
UPI0003D6D7D3 related cluster n=1 Tax=unknown RepID=UPI0003D6D7D3 rbh
N-acetyltransferase GCN5 {ECO:0000313|EMBL:CDJ98944.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
peptide synthetase
S5_scaffold_653_curated_20
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20031..21437
DNA (1407bp) protein (469aa)
Permease of the major facilitator superfamily n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAH5_MICTS rbh
Permease of the major facilitator superfamily {ECO:0000313|EMBL:CDJ98945.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
permease of the major facilitator superfamily rbh
S5_scaffold_653_curated_21
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21507..21848
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002DD9628
Uncharacterized transporter YclF {ECO:0000313|EMBL:CDJ98946.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
PTR family peptide transport protein
Displaying 21 items

View Taxonomy